Variant report

Variant	rs1578045
Chromosome Location	chr1:220567176-220567177
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs11118539	0.91[EUR][1000 genomes]
rs12043297	0.82[AFR][1000 genomes]
rs1338768	0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1361257	0.91[EUR][1000 genomes]
rs1578046	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1578048	0.84[EUR][1000 genomes]
rs2185157	0.84[EUR][1000 genomes]
rs4559509	0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4846636	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs61830869	0.91[EUR][1000 genomes]
rs7531705	0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:220565400-220583000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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