The 2.0 version of rSNPBase

Variant report

Variant rs15897
Chromosome Location chr12:51374923-51374924
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:51323000-51377200 Weak transcription Aorta Aorta
2 chr12:51328800-51378000 Weak transcription Brain Substantia Nigra brain
3 chr12:51331400-51378400 Weak transcription Placenta Amnion Placenta Amnion
4 chr12:51331800-51382000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr12:51331800-51382000 Weak transcription Ovary ovary
6 chr12:51341600-51378200 Weak transcription Right Ventricle heart
7 chr12:51341800-51383200 Weak transcription Fetal Brain Male brain
8 chr12:51342800-51378400 Weak transcription NHLF lung
9 chr12:51344000-51382000 Weak transcription Esophagus oesophagus
10 chr12:51344600-51381600 Weak transcription Spleen Spleen
11 chr12:51347200-51378000 Weak transcription Brain Angular Gyrus brain
12 chr12:51347400-51378000 Weak transcription Brain Anterior Caudate brain
13 chr12:51350800-51380600 Weak transcription Fetal Lung lung
14 chr12:51354400-51383800 Weak transcription Primary T killer naive cells fromperipheralblood blood
15 chr12:51355600-51378000 Weak transcription Muscle Satellite Cultured Cells --
16 chr12:51355800-51378000 Weak transcription A549 lung
17 chr12:51357600-51378000 Weak transcription Psoas Muscle Psoas
18 chr12:51358800-51377800 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr12:51359800-51380400 Weak transcription Fetal Kidney kidney
20 chr12:51360200-51381800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr12:51360600-51381000 Weak transcription Primary B cells from cord blood blood
22 chr12:51360600-51381800 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr12:51361600-51382200 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr12:51362400-51376800 Weak transcription Brain Hippocampus Middle brain
25 chr12:51362400-51378600 Weak transcription NH-A brain
26 chr12:51362400-51382000 Weak transcription Lung lung
27 chr12:51362600-51378000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
28 chr12:51362800-51384400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr12:51363400-51384000 Weak transcription Colonic Mucosa Colon
30 chr12:51363600-51381200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
31 chr12:51364000-51380400 Weak transcription K562 blood
32 chr12:51364600-51378400 Weak transcription Colon Smooth Muscle Colon
33 chr12:51364600-51384400 Weak transcription Primary T killer memory cells from peripheral blood blood
34 chr12:51366000-51377800 Weak transcription Brain Inferior Temporal Lobe brain
35 chr12:51366000-51378000 Weak transcription Brain Cingulate Gyrus brain
36 chr12:51366000-51378400 Weak transcription HSMMtube muscle
37 chr12:51366000-51378600 Weak transcription HSMM muscle
38 chr12:51366200-51380000 Weak transcription Dnd41 blood
39 chr12:51366400-51375200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr12:51366400-51375200 Weak transcription Skeletal Muscle Male skeletal muscle
41 chr12:51366400-51375400 Weak transcription Brain Germinal Matrix brain
42 chr12:51366400-51377800 Weak transcription NHDF-Ad bronchial
43 chr12:51366400-51378400 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr12:51366400-51379800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr12:51366600-51375400 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr12:51366600-51378000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr12:51366600-51380200 Weak transcription Fetal Muscle Trunk muscle
48 chr12:51366800-51375400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
49 chr12:51366800-51378400 Weak transcription Primary hematopoietic stem cells blood
50 chr12:51366800-51378600 Weak transcription Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015