Variant report

Variant	rs1591386
Chromosome Location	chr1:71215021-71215022
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:71214579..71217562-chr1:71511608..71514010,2	K562	blood:

Variant related genes	Relation type
ENSG00000050628	Chromatin interaction

Extended variants
information (count: 44 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:44)

rs_ID	r²[population]
rs10889891	0.89[ASN][1000 genomes]
rs10889892	0.84[ASN][1000 genomes]
rs11209705	0.87[ASN][1000 genomes]
rs11579908	0.85[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs11803673	0.89[ASN][1000 genomes]
rs11810467	0.87[ASN][1000 genomes]
rs12023582	0.93[CHB][hapmap]
rs12026456	0.87[ASN][1000 genomes]
rs12040186	0.87[ASN][1000 genomes]
rs12041247	1.00[CHB][hapmap]
rs12048245	1.00[CHB][hapmap]
rs12048393	1.00[CHB][hapmap]
rs12049445	0.87[ASN][1000 genomes]
rs12049500	1.00[ASN][1000 genomes]
rs12141116	1.00[CHB][hapmap]
rs1335002	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17131473	0.93[CHB][hapmap];0.80[ASN][1000 genomes]
rs17131476	0.82[CHB][hapmap]
rs17131485	0.93[CHB][hapmap]
rs17131488	1.00[CHB][hapmap]
rs1889598	1.00[ASN][1000 genomes]
rs1932050	1.00[ASN][1000 genomes]
rs2068652	0.93[CHB][hapmap]
rs2152121	1.00[ASN][1000 genomes]
rs2152122	1.00[ASN][1000 genomes]
rs2152126	1.00[CHB][hapmap];0.93[JPT][hapmap]
rs2782768	1.00[ASN][1000 genomes]
rs2782769	0.99[ASN][1000 genomes]
rs2782770	1.00[ASN][1000 genomes]
rs2782786	0.96[CEU][hapmap];1.00[CHB][hapmap];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2782787	0.96[CEU][hapmap];1.00[CHB][hapmap];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2782788	0.87[CEU][hapmap];1.00[CHB][hapmap];0.91[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2820513	1.00[CHB][hapmap]
rs2820540	0.93[ASN][1000 genomes]
rs2820541	1.00[ASN][1000 genomes]
rs2820542	1.00[ASN][1000 genomes]
rs34087524	0.83[ASN][1000 genomes]
rs34745168	0.83[ASN][1000 genomes]
rs35615554	0.83[ASN][1000 genomes]
rs4320734	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs55884889	0.80[ASN][1000 genomes]
rs74086786	0.88[ASN][1000 genomes]
rs74086973	0.80[ASN][1000 genomes]
rs915220	1.00[ASN][1000 genomes]

No data

Chromatin state (count:0 , 50 per page) page:

No data

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links