Variant report

Variant rs164148
Chromosome Location chr1:162338485-162338486
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:162321200-162357600 Weak transcription Fetal Kidney kidney
2 chr1:162321200-162358000 Weak transcription Spleen Spleen
3 chr1:162323600-162358200 Weak transcription Brain Substantia Nigra brain
4 chr1:162323800-162361400 Weak transcription HUES48 Cell Line embryonic stem cell
5 chr1:162324000-162352600 Weak transcription HUES6 Cell Line embryonic stem cell
6 chr1:162324000-162355800 Weak transcription Brain Anterior Caudate brain
7 chr1:162324400-162341400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr1:162325600-162359600 Weak transcription Brain Hippocampus Middle brain
9 chr1:162325800-162352600 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr1:162326000-162341200 Weak transcription iPS-18 Cell Line embryonic stem cell
11 chr1:162326200-162352000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr1:162326200-162361400 Weak transcription iPS-20b Cell Line embryonic stem cell
13 chr1:162326800-162346600 Weak transcription Brain Angular Gyrus brain
14 chr1:162327400-162361600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr1:162329800-162339000 Weak transcription HUES64 Cell Line embryonic stem cell
16 chr1:162330400-162339000 Weak transcription Stomach Mucosa stomach
17 chr1:162330400-162346200 Strong transcription Cortex derived primary cultured neurospheres brain
18 chr1:162334000-162346000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr1:162334600-162340200 Strong transcription Primary neutrophils fromperipheralblood blood
20 chr1:162334600-162340800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr1:162334600-162341200 Strong transcription Fetal Brain Female brain
22 chr1:162334800-162340400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr1:162335400-162341600 Weak transcription HSMMtube muscle
24 chr1:162335600-162339400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr1:162335800-162341600 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr1:162335800-162344600 Enhancers K562 blood
27 chr1:162336200-162338800 Strong transcription Fetal Intestine Small intestine
28 chr1:162336800-162338600 Strong transcription H1 Cell Line embryonic stem cell
29 chr1:162336800-162340600 Genic enhancers Breast Myoepithelial Primary Cells Breast
30 chr1:162336800-162342400 Weak transcription Right Atrium heart
31 chr1:162337000-162353400 Weak transcription Rectal Smooth Muscle rectum
32 chr1:162337200-162338600 Strong transcription Fetal Adrenal Gland Adrenal Gland
33 chr1:162337200-162338600 Strong transcription Fetal Stomach stomach
34 chr1:162337200-162341600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr1:162337200-162342400 Weak transcription Left Ventricle heart
36 chr1:162337200-162356400 Weak transcription Colon Smooth Muscle Colon
37 chr1:162337200-162361600 Weak transcription Right Ventricle heart
38 chr1:162337400-162340000 Genic enhancers Hela-S3 cervix
39 chr1:162337600-162343400 Enhancers Rectal Mucosa Donor 31 rectum
40 chr1:162337600-162344600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
41 chr1:162337600-162351800 Weak transcription Stomach Smooth Muscle stomach
42 chr1:162337600-162352800 Weak transcription Lung lung
43 chr1:162337600-162361600 Weak transcription Adipose Nuclei Adipose
44 chr1:162337800-162339000 Weak transcription NHEK skin
45 chr1:162337800-162339200 Weak transcription Esophagus oesophagus
46 chr1:162337800-162341200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr1:162337800-162341600 Weak transcription Duodenum Mucosa Duodenum
48 chr1:162337800-162344200 Weak transcription Brain Germinal Matrix brain
49 chr1:162337800-162352000 Weak transcription Aorta Aorta
50 chr1:162338000-162339000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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