The 2.0 version of rSNPBase

Variant report

Variant rs166925
Chromosome Location chr19:41926098-41926099
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:41905000-41930800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr19:41905200-41926600 Weak transcription Small Intestine intestine
3 chr19:41913800-41927000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr19:41913800-41932600 Weak transcription iPS-20b Cell Line embryonic stem cell
5 chr19:41915200-41932600 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr19:41915400-41932800 Weak transcription Hela-S3 cervix
7 chr19:41915600-41932800 Weak transcription NH-A brain
8 chr19:41916000-41932000 Strong transcription Fetal Stomach stomach
9 chr19:41916000-41932400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr19:41916200-41926200 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr19:41916200-41927000 Strong transcription Placenta Placenta
12 chr19:41916200-41928000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr19:41916200-41932000 Weak transcription HUVEC blood vessel
14 chr19:41916400-41928400 Weak transcription K562 blood
15 chr19:41916400-41930800 Strong transcription Primary T helper cells fromperipheralblood blood
16 chr19:41916400-41931600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr19:41916400-41932000 Strong transcription Primary T helper naive cells fromperipheralblood blood
18 chr19:41916400-41932600 Strong transcription Primary B cells from peripheral blood blood
19 chr19:41916400-41932800 Strong transcription Brain Germinal Matrix brain
20 chr19:41916400-41932800 Strong transcription Fetal Brain Female brain
21 chr19:41916400-41933000 Strong transcription Thymus Thymus
22 chr19:41916600-41926800 Strong transcription Fetal Thymus thymus
23 chr19:41916600-41929600 Strong transcription Colon Smooth Muscle Colon
24 chr19:41916600-41930200 Strong transcription Primary T cells fromperipheralblood blood
25 chr19:41916600-41930800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
26 chr19:41916600-41931200 Strong transcription Rectal Smooth Muscle rectum
27 chr19:41916600-41931400 Strong transcription Primary T regulatory cells fromperipheralblood blood
28 chr19:41916800-41926600 Strong transcription Sigmoid Colon Sigmoid Colon
29 chr19:41916800-41930600 Strong transcription Duodenum Smooth Muscle Duodenum
30 chr19:41916800-41932200 Strong transcription Primary T cells from cord blood blood
31 chr19:41916800-41932200 Strong transcription Ovary ovary
32 chr19:41917000-41927200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr19:41917000-41932000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr19:41918200-41927600 Strong transcription Brain Anterior Caudate brain
35 chr19:41918200-41932000 Weak transcription NHEK skin
36 chr19:41918200-41932200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr19:41918200-41932400 Weak transcription Right Atrium heart
38 chr19:41918200-41932800 Strong transcription Brain Hippocampus Middle brain
39 chr19:41918400-41932800 Strong transcription Brain Cingulate Gyrus brain
40 chr19:41918600-41932400 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr19:41918600-41932800 Strong transcription Brain Angular Gyrus brain
42 chr19:41918800-41931600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr19:41918800-41932600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr19:41918800-41932800 Strong transcription Brain Inferior Temporal Lobe brain
45 chr19:41919000-41929400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr19:41919000-41931000 Strong transcription Breast Myoepithelial Primary Cells Breast
47 chr19:41919000-41931600 Strong transcription Primary T helper cells PMA-I stimulated --
48 chr19:41919200-41931800 Strong transcription Cortex derived primary cultured neurospheres brain
49 chr19:41919400-41930000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr19:41919600-41926200 Weak transcription Fetal Brain Male brain

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Last update: Aug 31, 2015