The 2.0 version of rSNPBase

Variant report

Variant rs16828209
Chromosome Location chr1:169771250-169771251
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:169764600-169782400 Weak transcription Pancreas Pancrea
2 chr1:169764800-169793200 Weak transcription Aorta Aorta
3 chr1:169764800-169793200 Weak transcription Brain Hippocampus Middle brain
4 chr1:169764800-169793400 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr1:169764800-169795200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr1:169764800-169796200 Weak transcription Spleen Spleen
7 chr1:169764800-169818200 Weak transcription Esophagus oesophagus
8 chr1:169764800-169818200 Weak transcription Lung lung
9 chr1:169764800-169823600 Weak transcription Gastric stomach
10 chr1:169765000-169776000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr1:169765000-169786000 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr1:169765000-169793200 Weak transcription Fetal Brain Male brain
13 chr1:169765000-169808000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr1:169765000-169821800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr1:169765200-169771800 Weak transcription Fetal Muscle Leg muscle
16 chr1:169765200-169771800 Weak transcription Monocytes-CD14+_RO01746 blood
17 chr1:169765200-169772000 Weak transcription Primary B cells from cord blood blood
18 chr1:169765200-169772000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr1:169765200-169772000 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr1:169765200-169772200 Weak transcription Primary neutrophils fromperipheralblood blood
21 chr1:169765200-169772200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
22 chr1:169765200-169772200 Weak transcription Adipose Nuclei Adipose
23 chr1:169765200-169772200 Weak transcription Fetal Adrenal Gland Adrenal Gland
24 chr1:169765200-169772600 Weak transcription Placenta Placenta
25 chr1:169765200-169772800 Weak transcription Primary T cells fromperipheralblood blood
26 chr1:169765200-169772800 Weak transcription Fetal Muscle Trunk muscle
27 chr1:169765200-169772800 Weak transcription Stomach Smooth Muscle stomach
28 chr1:169765200-169773000 Weak transcription Primary B cells from peripheral blood blood
29 chr1:169765200-169774000 Weak transcription Fetal Intestine Large intestine
30 chr1:169765200-169774200 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr1:169765200-169774200 Weak transcription Left Ventricle heart
32 chr1:169765200-169774400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr1:169765200-169774400 Weak transcription HSMM muscle
34 chr1:169765200-169776600 Weak transcription Primary T helper naive cells fromperipheralblood blood
35 chr1:169765200-169779600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
36 chr1:169765200-169781200 Weak transcription Primary T killer naive cells fromperipheralblood blood
37 chr1:169765200-169781600 Weak transcription Brain Substantia Nigra brain
38 chr1:169765200-169783200 Weak transcription Primary T killer memory cells from peripheral blood blood
39 chr1:169765200-169793200 Weak transcription H9 Cell Line embryonic stem cell
40 chr1:169765200-169793200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr1:169765200-169793400 Weak transcription Fetal Kidney kidney
42 chr1:169765200-169797400 Weak transcription HSMMtube muscle
43 chr1:169765200-169802000 Weak transcription Skeletal Muscle Male skeletal muscle
44 chr1:169765200-169807800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr1:169765200-169808000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr1:169765200-169809000 Weak transcription Primary T helper cells fromperipheralblood blood
47 chr1:169765200-169814800 Weak transcription Brain Anterior Caudate brain
48 chr1:169765200-169815200 Weak transcription Rectal Smooth Muscle rectum
49 chr1:169765200-169818800 Weak transcription Brain Angular Gyrus brain
50 chr1:169765200-169820600 Weak transcription Psoas Muscle Psoas

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Last update: Aug 31, 2015