The 2.0 version of rSNPBase

Variant report

Variant rs16836870
Chromosome Location chr1:155512371-155512372
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:155476400-155518200 Weak transcription HMEC breast
2 chr1:155478400-155518200 Weak transcription Stomach Smooth Muscle stomach
3 chr1:155483200-155524400 Weak transcription Fetal Brain Female brain
4 chr1:155483400-155528600 Weak transcription Cortex derived primary cultured neurospheres brain
5 chr1:155488000-155513400 Weak transcription Fetal Stomach stomach
6 chr1:155489800-155516200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr1:155489800-155529400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
8 chr1:155490000-155513000 Weak transcription Fetal Muscle Leg muscle
9 chr1:155491200-155521800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr1:155491400-155523400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr1:155491600-155516200 Weak transcription NHEK skin
12 chr1:155493400-155514200 Weak transcription Gastric stomach
13 chr1:155496600-155518400 Weak transcription HSMM muscle
14 chr1:155496600-155529800 Weak transcription Muscle Satellite Cultured Cells --
15 chr1:155497800-155513600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr1:155498000-155513000 Weak transcription Hela-S3 cervix
17 chr1:155499600-155517000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr1:155500000-155516400 Weak transcription NHDF-Ad bronchial
19 chr1:155500000-155524400 Weak transcription Primary monocytes fromperipheralblood blood
20 chr1:155500200-155519800 Weak transcription Primary neutrophils fromperipheralblood blood
21 chr1:155501800-155523200 Weak transcription Brain Hippocampus Middle brain
22 chr1:155502000-155516200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr1:155502000-155518000 Weak transcription Brain Anterior Caudate brain
24 chr1:155502000-155518800 Weak transcription Brain Inferior Temporal Lobe brain
25 chr1:155503400-155519600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
26 chr1:155503800-155523200 Weak transcription Fetal Thymus thymus
27 chr1:155505200-155513000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr1:155505400-155518200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr1:155505600-155523400 Weak transcription Placenta Placenta
30 chr1:155506200-155513600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr1:155506400-155523400 Weak transcription Primary hematopoietic stem cells blood
32 chr1:155506400-155529400 Weak transcription Osteobl bone
33 chr1:155506400-155529600 Weak transcription Fetal Lung lung
34 chr1:155506600-155513600 Weak transcription Fetal Intestine Large intestine
35 chr1:155506600-155516800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr1:155506800-155513400 Weak transcription Thymus Thymus
37 chr1:155506800-155518000 Weak transcription Fetal Muscle Trunk muscle
38 chr1:155507000-155530200 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr1:155507400-155528000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr1:155507800-155513000 Weak transcription Fetal Intestine Small intestine
41 chr1:155509600-155517400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
42 chr1:155509800-155513400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr1:155510200-155516000 Weak transcription Primary B cells from cord blood blood
44 chr1:155510600-155513400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr1:155510600-155513400 Weak transcription Primary hematopoietic stem cells short term culture blood
46 chr1:155510600-155513400 Weak transcription Psoas Muscle Psoas
47 chr1:155510600-155513800 Weak transcription Lung lung
48 chr1:155510600-155514200 Weak transcription Left Ventricle heart
49 chr1:155510600-155518000 Weak transcription Right Atrium heart
50 chr1:155510600-155530200 Weak transcription Right Ventricle heart

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Last update: Aug 31, 2015