Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs1112039	0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12205058	0.92[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1319624	0.80[AMR][1000 genomes]
rs1387416	0.82[AMR][1000 genomes]
rs1489375	0.82[AMR][1000 genomes]
rs1615022	0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1615828	0.82[AMR][1000 genomes]
rs1686317	0.82[AMR][1000 genomes]
rs1760658	0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1767855	0.81[AMR][1000 genomes]
rs1767858	0.82[AMR][1000 genomes]
rs1767859	0.82[AMR][1000 genomes]
rs1767861	0.84[AMR][1000 genomes]
rs2635111	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2635114	0.82[AMR][1000 genomes]
rs2635115	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2635116	0.82[AMR][1000 genomes]
rs2781174	0.82[AMR][1000 genomes]
rs2781175	0.86[AMR][1000 genomes]
rs2788992	0.82[AMR][1000 genomes]
rs763672	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7758470	0.87[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs7773856	0.85[EUR][1000 genomes]
rs9352088	0.84[CHB][hapmap];0.82[JPT][hapmap]
rs9352089	0.83[CHB][hapmap];0.82[JPT][hapmap]
rs9360767	0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3327625	chr6:74716120-74971605	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv886162	chr6:74903797-75006170	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv886163	chr6:74944460-75006170	Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Flanking Active TSS	TF binding region CpG island	1 gene(s)	inside rSNPs	diseases
4	nsv886164	chr6:74944460-75024313	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	esv2758061	chr6:74961996-75128165	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
6	esv2759442	chr6:74961996-75162222	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:74960400-74965600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr6:74961400-74966400	Weak transcription	NHLF	lung
3	chr6:74961600-74966600	Weak transcription	Adipose Nuclei	Adipose
4	chr6:74961800-74966600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr6:74963200-74964000	Enhancers	NHEK	skin
6	chr6:74963400-74964000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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