Variant report

Variant	rs16882343
Chromosome Location	chr8:34344293-34344294
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs1373801	0.80[AFR][1000 genomes]
rs1373802	0.96[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv6147	chr8:34314029-34359124	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:34342800-34344600	Enhancers	iPS-18 Cell Line	embryonic stem cell
2	chr8:34342800-34345000	Enhancers	HUES64 Cell Line	embryonic stem cell
3	chr8:34343000-34344800	Enhancers	iPS-20b Cell Line	embryonic stem cell
4	chr8:34343000-34345000	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr8:34343800-34345800	Enhancers	Fetal Kidney	kidney
6	chr8:34344000-34345800	Enhancers	Brain Germinal Matrix	brain

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links