Variant report

Variant rs16920598
Chromosome Location chr9:589934-589935
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:549800-593800 Weak transcription Lung lung
2 chr9:581400-591400 Weak transcription Fetal Intestine Large intestine
3 chr9:582000-591400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr9:582600-591400 Weak transcription Gastric stomach
5 chr9:583000-594400 Weak transcription Fetal Kidney kidney
6 chr9:588200-590600 Enhancers Duodenum Mucosa Duodenum
7 chr9:588800-590200 Enhancers Brain Hippocampus Middle brain
8 chr9:588800-591000 Weak transcription Fetal Intestine Small intestine
9 chr9:588800-591400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
10 chr9:589000-590000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr9:589000-590200 Enhancers ES-I3 Cell Line embryonic stem cell
12 chr9:589000-590200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr9:589000-590400 Enhancers iPS-18 Cell Line embryonic stem cell
14 chr9:589000-590400 Enhancers Brain Substantia Nigra brain
15 chr9:589000-590400 Enhancers Right Atrium heart
16 chr9:589000-591600 Enhancers Brain Cingulate Gyrus brain
17 chr9:589000-592000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr9:589200-590000 Enhancers H9 Cell Line embryonic stem cell
19 chr9:589200-590000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr9:589200-590000 Enhancers Left Ventricle heart
21 chr9:589200-590000 Enhancers Ovary ovary
22 chr9:589200-590200 Enhancers HUES64 Cell Line embryonic stem cell
23 chr9:589200-590200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
24 chr9:589200-590200 Enhancers Fetal Muscle Leg muscle
25 chr9:589200-590200 Enhancers Pancreas Pancrea
26 chr9:589200-590200 Enhancers Right Ventricle heart
27 chr9:589200-590400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
28 chr9:589200-590400 Enhancers Brain Angular Gyrus brain
29 chr9:589200-590400 Enhancers Brain Inferior Temporal Lobe brain
30 chr9:589200-590400 Enhancers Rectal Smooth Muscle rectum
31 chr9:589200-591800 Enhancers Cortex derived primary cultured neurospheres brain
32 chr9:589200-592600 Enhancers Brain Anterior Caudate brain
33 chr9:589400-590000 Enhancers HUES6 Cell Line embryonic stem cell
34 chr9:589400-590000 Enhancers Aorta Aorta
35 chr9:589400-590200 Enhancers HUES48 Cell Line embryonic stem cell
36 chr9:589400-590200 Enhancers Primary hematopoietic stem cells short term culture blood
37 chr9:589400-590200 Enhancers Esophagus oesophagus
38 chr9:589400-590200 Enhancers Psoas Muscle Psoas
39 chr9:589400-590200 Enhancers Sigmoid Colon Sigmoid Colon
40 chr9:589400-590200 Enhancers Small Intestine intestine
41 chr9:589400-590400 Enhancers Fetal Lung lung
42 chr9:589400-590600 Enhancers Colon Smooth Muscle Colon
43 chr9:589400-590800 Enhancers Primary neutrophils fromperipheralblood blood
44 chr9:589400-592800 Enhancers HMEC breast
45 chr9:589400-593400 Enhancers A549 lung
46 chr9:589600-590000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
47 chr9:589600-590200 Enhancers H1 Cell Line embryonic stem cell
48 chr9:589600-590200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr9:589600-590200 Enhancers Stomach Mucosa stomach
50 chr9:589600-590400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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