Variant report

Variant rs16922407
Chromosome Location chr9:677211-677212
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:653400-698000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr9:670800-677600 Weak transcription Gastric stomach
3 chr9:670800-706800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr9:673200-677400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr9:673600-677800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr9:673600-677800 Weak transcription Pancreas Pancrea
7 chr9:673800-677600 Enhancers iPS-20b Cell Line embryonic stem cell
8 chr9:674000-677600 Weak transcription Right Ventricle heart
9 chr9:674400-677400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
10 chr9:674400-677400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr9:674400-677400 Weak transcription Aorta Aorta
12 chr9:674400-677400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr9:674400-677600 Weak transcription Left Ventricle heart
14 chr9:674400-677600 Weak transcription Psoas Muscle Psoas
15 chr9:674400-677600 Weak transcription Thymus Thymus
16 chr9:674400-677800 Weak transcription Fetal Thymus thymus
17 chr9:674400-682800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr9:674400-682800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr9:674400-693200 Weak transcription Primary T cells from cord blood blood
20 chr9:674600-683200 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr9:675400-677400 Enhancers Dnd41 blood
22 chr9:675400-678000 Enhancers Cortex derived primary cultured neurospheres brain
23 chr9:675600-677600 Enhancers HUES48 Cell Line embryonic stem cell
24 chr9:675600-678000 Enhancers HUES64 Cell Line embryonic stem cell
25 chr9:675800-677400 Enhancers HUES6 Cell Line embryonic stem cell
26 chr9:676200-677600 Enhancers H1 Cell Line embryonic stem cell
27 chr9:676200-678000 Flanking Active TSS NHEK skin
28 chr9:676400-677400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
29 chr9:676400-677400 Flanking Active TSS A549 lung
30 chr9:676400-683000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr9:676600-677400 Enhancers Fetal Intestine Small intestine
32 chr9:676600-677600 Enhancers Stomach Mucosa stomach
33 chr9:676600-679000 Enhancers Fetal Intestine Large intestine
34 chr9:676800-677400 Enhancers NH-A brain
35 chr9:676800-677600 Enhancers iPS-18 Cell Line embryonic stem cell
36 chr9:676800-677600 Weak transcription Esophagus oesophagus
37 chr9:676800-678400 Enhancers Fetal Kidney kidney
38 chr9:677000-677400 Flanking Active TSS Liver Liver
39 chr9:677000-677400 Flanking Active TSS Colon Smooth Muscle Colon
40 chr9:677000-677400 Active TSS HepG2 liver
41 chr9:677000-677600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr9:677000-677600 Flanking Active TSS Pancreatic Islets Pancreatic Islet
43 chr9:677000-678200 Active TSS Duodenum Mucosa Duodenum
44 chr9:677000-678200 Flanking Active TSS HMEC breast
45 chr9:677000-682800 Weak transcription H9 Cell Line embryonic stem cell
46 chr9:677200-677400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr9:677200-677400 Flanking Active TSS Brain Angular Gyrus brain
48 chr9:677200-677400 Flanking Active TSS Brain Cingulate Gyrus brain
49 chr9:677200-677400 Flanking Active TSS Fetal Lung lung
50 chr9:677200-677400 Flanking Active TSS Rectal Smooth Muscle rectum

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