Variant report

Variant rs16922643
Chromosome Location chr9:693472-693473
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:653400-698000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr9:670800-706800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr9:678000-695200 Weak transcription Colonic Mucosa Colon
4 chr9:682800-696800 Enhancers Placenta Amnion Placenta Amnion
5 chr9:683600-694600 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr9:686800-693600 Weak transcription Pancreas Pancrea
7 chr9:686800-694600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr9:686800-694600 Weak transcription Lung lung
9 chr9:687000-694400 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr9:687600-693800 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr9:688400-693600 Weak transcription Psoas Muscle Psoas
12 chr9:688400-698000 Weak transcription Gastric stomach
13 chr9:688800-695200 Weak transcription Primary B cells from peripheral blood blood
14 chr9:689600-693600 Weak transcription Esophagus oesophagus
15 chr9:690000-694400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr9:690400-697000 Enhancers Stomach Mucosa stomach
17 chr9:690800-700600 Weak transcription Small Intestine intestine
18 chr9:691000-698400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr9:691200-706600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr9:692000-695400 Enhancers Primary hematopoietic stem cells short term culture blood
21 chr9:692000-697400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr9:692000-698800 Enhancers Breast Myoepithelial Primary Cells Breast
23 chr9:692200-694800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr9:692200-697600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr9:692600-693600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr9:692600-695600 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr9:692600-696600 Enhancers Fetal Intestine Large intestine
28 chr9:692800-693600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr9:692800-693600 Flanking Active TSS Adipose Nuclei Adipose
30 chr9:692800-693600 Flanking Active TSS Colon Smooth Muscle Colon
31 chr9:692800-693600 Flanking Active TSS Rectal Smooth Muscle rectum
32 chr9:692800-693600 Flanking Active TSS Skeletal Muscle Female skeletal muscle
33 chr9:692800-693600 Flanking Active TSS NHDF-Ad bronchial
34 chr9:692800-693800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr9:692800-694600 Active TSS Rectal Mucosa Donor 29 rectum
36 chr9:692800-694800 Flanking Active TSS Fetal Lung lung
37 chr9:692800-695000 Enhancers Placenta Placenta
38 chr9:692800-695200 Enhancers Dnd41 blood
39 chr9:692800-695600 Flanking Active TSS NHEK skin
40 chr9:692800-695800 Enhancers Fetal Intestine Small intestine
41 chr9:692800-695800 Flanking Active TSS HUVEC blood vessel
42 chr9:692800-696000 Enhancers Fetal Thymus thymus
43 chr9:692800-696600 Enhancers Fetal Adrenal Gland Adrenal Gland
44 chr9:693000-693800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
45 chr9:693000-693800 Enhancers HUES6 Cell Line embryonic stem cell
46 chr9:693000-694000 Active TSS Cortex derived primary cultured neurospheres brain
47 chr9:693000-694000 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
48 chr9:693000-694000 Active TSS Duodenum Smooth Muscle Duodenum
49 chr9:693000-694200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr9:693000-694400 Active TSS Brain Cingulate Gyrus brain

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