The 2.0 version of rSNPBase

Variant report

Variant rs16926621
Chromosome Location chr8:48387387-48387388
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:48353000-48390600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr8:48362800-48387400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr8:48362800-48387600 Weak transcription Ovary ovary
4 chr8:48373400-48390200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr8:48374600-48388800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr8:48374800-48407000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr8:48375000-48392000 Weak transcription Aorta Aorta
8 chr8:48376600-48390000 Weak transcription Primary B cells from cord blood blood
9 chr8:48377800-48392200 Weak transcription Primary hematopoietic stem cells blood
10 chr8:48378000-48390400 Weak transcription Primary hematopoietic stem cells short term culture blood
11 chr8:48378000-48392200 Weak transcription Fetal Kidney kidney
12 chr8:48381200-48392000 Weak transcription HSMMtube muscle
13 chr8:48381600-48392000 Weak transcription Right Ventricle heart
14 chr8:48382400-48390200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
15 chr8:48383000-48389200 Enhancers Fetal Intestine Large intestine
16 chr8:48383400-48388800 Weak transcription Psoas Muscle Psoas
17 chr8:48383600-48389400 Enhancers Fetal Intestine Small intestine
18 chr8:48384200-48387800 Weak transcription Small Intestine intestine
19 chr8:48384400-48396000 Weak transcription Primary T cells from cord blood blood
20 chr8:48384600-48389000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
21 chr8:48384600-48389200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr8:48384600-48389200 Enhancers Pancreas Pancrea
23 chr8:48384600-48389400 Enhancers Stomach Mucosa stomach
24 chr8:48384600-48396800 Weak transcription Fetal Brain Male brain
25 chr8:48385000-48388600 Weak transcription Gastric stomach
26 chr8:48385000-48388800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr8:48385000-48390200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
28 chr8:48385000-48390400 Weak transcription Primary neutrophils fromperipheralblood blood
29 chr8:48385000-48392000 Weak transcription Right Atrium heart
30 chr8:48385000-48397000 Weak transcription Colonic Mucosa Colon
31 chr8:48385200-48390200 Weak transcription Monocytes-CD14+_RO01746 blood
32 chr8:48385200-48390400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr8:48385600-48388000 Enhancers A549 lung
34 chr8:48385600-48389400 Enhancers Fetal Lung lung
35 chr8:48385800-48390200 Weak transcription Primary monocytes fromperipheralblood blood
36 chr8:48386000-48388000 Enhancers Breast Myoepithelial Primary Cells Breast
37 chr8:48386200-48388000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr8:48386200-48388400 Enhancers NHEK skin
39 chr8:48386200-48388800 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr8:48386200-48389200 Enhancers Duodenum Mucosa Duodenum
41 chr8:48386200-48390400 Weak transcription Lung lung
42 chr8:48386400-48387600 Weak transcription Sigmoid Colon Sigmoid Colon
43 chr8:48386400-48392000 Weak transcription HepG2 liver
44 chr8:48386600-48387600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr8:48386600-48387600 Weak transcription Esophagus oesophagus
46 chr8:48386600-48392000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr8:48386800-48388800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr8:48387000-48387400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr8:48387000-48387400 Enhancers Colon Smooth Muscle Colon
50 chr8:48387000-48387400 Weak transcription Rectal Mucosa Donor 31 rectum

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Last update: Aug 31, 2015