Variant report

Variant	rs16935135
Chromosome Location	chr12:11741965-11741966
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr12:11741927..11744387-chr12:11753982..11756030,2	MCF-7	breast:
2	chr12:11736309..11738429-chr12:11739603..11742202,2	K562	blood:

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10491979	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10491981	0.93[EUR][1000 genomes]
rs12296206	1.00[JPT][hapmap]
rs12304175	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.81[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12307843	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12318942	1.00[JPT][hapmap]
rs1641623	1.00[JPT][hapmap]
rs16934780	1.00[JPT][hapmap]
rs16935010	0.90[EUR][1000 genomes]
rs16935013	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17745320	0.82[EUR][1000 genomes]
rs17745379	0.96[EUR][1000 genomes]
rs17745415	1.00[EUR][1000 genomes]
rs17818016	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[TSI][hapmap];0.96[EUR][1000 genomes]
rs17818022	0.96[EUR][1000 genomes]
rs1795551	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57529731	0.96[EUR][1000 genomes]
rs61472986	0.96[EUR][1000 genomes]
rs7302311	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73286605	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73286618	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7954816	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7972594	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7975032	0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7975230	1.00[JPT][hapmap]
rs7975331	1.00[JPT][hapmap]
rs969769	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:11730800-11762200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr12:11734600-11742800	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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