Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:50003812..50005388-chr8:50034210..50037111,2	K562	blood:

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10448011	0.95[EUR][1000 genomes]
rs12056729	0.95[EUR][1000 genomes]
rs12550346	0.97[EUR][1000 genomes]
rs12674652	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs13248468	0.95[EUR][1000 genomes]
rs13250382	0.95[EUR][1000 genomes]
rs13278300	0.98[EUR][1000 genomes]
rs16922692	0.83[ASN][1000 genomes]
rs16939396	0.95[EUR][1000 genomes]
rs16939398	0.83[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs16939408	0.95[EUR][1000 genomes]
rs16939445	0.98[EUR][1000 genomes]
rs1876718	0.98[EUR][1000 genomes]
rs2667282	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2891720	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs33961425	0.82[ASN][1000 genomes]
rs34381258	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3735973	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs4510886	0.95[EUR][1000 genomes]
rs4873311	0.83[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4873316	0.95[EUR][1000 genomes]
rs59888224	0.95[EUR][1000 genomes]
rs72640596	0.83[AFR][1000 genomes]
rs9650217	1.00[ASW][hapmap];0.81[CHB][hapmap];0.84[CHD][hapmap];0.90[JPT][hapmap];0.83[AFR][1000 genomes];0.82[AMR][1000 genomes];0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1025068	chr8:49953397-50370208	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
2	esv3401785	chr8:49986448-50018640	Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Genic enhancers Flanking Active TSS Strong transcription	Chromatin interactive region lncRNA miRNA target site	2 gene(s)	inside rSNPs	diseases
3	esv3383502	chr8:49991448-50020707	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv1023325	chr8:49994793-50050571	Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:50002800-50007800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr8:50004200-50006000	Enhancers	K562	blood
3	chr8:50004200-50006200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr8:50004200-50006400	Enhancers	Primary hematopoietic stem cells short term culture	blood
5	chr8:50004200-50006600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr8:50004200-50006800	Enhancers	iPS-20b Cell Line	embryonic stem cell
7	chr8:50004400-50006400	Enhancers	iPS-18 Cell Line	embryonic stem cell
8	chr8:50004600-50006000	Enhancers	HUES48 Cell Line	embryonic stem cell
9	chr8:50004800-50006000	Enhancers	iPS-15b Cell Line	embryonic stem cell
10	chr8:50004800-50006200	Enhancers	HUES64 Cell Line	embryonic stem cell
11	chr8:50005000-50005200	Enhancers	H1 Cell Line	embryonic stem cell
12	chr8:50005000-50005200	Enhancers	H9 Cell Line	embryonic stem cell
13	chr8:50005000-50005600	Enhancers	HUES6 Cell Line	embryonic stem cell

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