The 2.0 version of rSNPBase

Variant report

Variant rs16942367
Chromosome Location chr18:24074827-24074828
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:24033000-24103800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr18:24039600-24082600 Weak transcription Primary T cells from cord blood blood
3 chr18:24039800-24083200 Weak transcription Fetal Lung lung
4 chr18:24050600-24077400 Weak transcription Fetal Brain Female brain
5 chr18:24050800-24075000 Weak transcription Psoas Muscle Psoas
6 chr18:24050800-24077000 Weak transcription Brain Germinal Matrix brain
7 chr18:24051000-24090000 Weak transcription Brain Inferior Temporal Lobe brain
8 chr18:24051600-24094800 Weak transcription Stomach Smooth Muscle stomach
9 chr18:24052000-24079600 Weak transcription Brain Angular Gyrus brain
10 chr18:24052400-24080800 Weak transcription Aorta Aorta
11 chr18:24059200-24084800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr18:24059600-24085000 Weak transcription Fetal Muscle Trunk muscle
13 chr18:24059800-24090000 Weak transcription Adipose Nuclei Adipose
14 chr18:24061800-24082400 Weak transcription Fetal Kidney kidney
15 chr18:24062200-24083000 Weak transcription HSMM muscle
16 chr18:24062600-24081600 Weak transcription HUES64 Cell Line embryonic stem cell
17 chr18:24062800-24087600 Weak transcription Placenta Placenta
18 chr18:24063000-24079600 Weak transcription Left Ventricle heart
19 chr18:24063800-24091200 Weak transcription Lung lung
20 chr18:24063800-24095000 Weak transcription iPS-20b Cell Line embryonic stem cell
21 chr18:24064000-24075000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr18:24064000-24082800 Weak transcription iPS-18 Cell Line embryonic stem cell
23 chr18:24065000-24081200 Weak transcription H1 Cell Line embryonic stem cell
24 chr18:24065400-24080800 Weak transcription Pancreas Pancrea
25 chr18:24065400-24083000 Weak transcription Brain Hippocampus Middle brain
26 chr18:24065600-24083400 Weak transcription Brain Cingulate Gyrus brain
27 chr18:24065600-24091200 Weak transcription Fetal Adrenal Gland Adrenal Gland
28 chr18:24065800-24075000 Weak transcription Brain Anterior Caudate brain
29 chr18:24065800-24088000 Weak transcription Fetal Heart heart
30 chr18:24067800-24093400 Weak transcription NH-A brain
31 chr18:24068000-24081000 Weak transcription GM12878-XiMat blood
32 chr18:24068200-24082600 Weak transcription Fetal Intestine Large intestine
33 chr18:24068400-24079600 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr18:24068800-24081800 Weak transcription NHLF lung
35 chr18:24069200-24077800 Weak transcription Esophagus oesophagus
36 chr18:24069200-24083400 Weak transcription Rectal Smooth Muscle rectum
37 chr18:24070200-24091000 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr18:24070400-24091400 Weak transcription Gastric stomach
39 chr18:24071200-24077800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr18:24071600-24075400 Weak transcription Dnd41 blood
41 chr18:24071600-24076600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr18:24071600-24077600 Weak transcription Ovary ovary
43 chr18:24071600-24081000 Weak transcription Stomach Mucosa stomach
44 chr18:24071600-24081800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
45 chr18:24071600-24091200 Weak transcription Fetal Muscle Leg muscle
46 chr18:24071800-24080000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr18:24071800-24080000 Weak transcription Fetal Intestine Small intestine
48 chr18:24071800-24088400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
49 chr18:24071800-24089000 Weak transcription Cortex derived primary cultured neurospheres brain
50 chr18:24071800-24089800 Weak transcription Right Ventricle heart

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Last update: Aug 31, 2015