Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr18:44810240..44811750-chr18:44815375..44817076,2	K562	blood:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs1347339	1.00[YRI][hapmap];0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16950322	1.00[YRI][hapmap];0.91[AFR][1000 genomes]
rs16950355	0.91[AFR][1000 genomes]
rs16950594	0.91[AFR][1000 genomes]
rs16950662	0.91[AFR][1000 genomes]
rs16950719	1.00[AFR][1000 genomes]
rs16950735	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16950736	1.00[AFR][1000 genomes]
rs16950741	1.00[AFR][1000 genomes]
rs16950742	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16950744	1.00[YRI][hapmap];1.00[AFR][1000 genomes]
rs16950754	1.00[YRI][hapmap];1.00[AFR][1000 genomes]
rs16950767	1.00[YRI][hapmap];1.00[AFR][1000 genomes]
rs16950777	1.00[AFR][1000 genomes]
rs56014831	1.00[AFR][1000 genomes]
rs7234151	1.00[YRI][hapmap];0.91[AFR][1000 genomes]
rs7239748	0.91[AFR][1000 genomes]
rs72906498	0.91[AFR][1000 genomes]
rs72908518	1.00[AFR][1000 genomes]
rs72908529	1.00[AFR][1000 genomes]
rs72908537	1.00[AFR][1000 genomes]
rs72908538	0.84[AFR][1000 genomes]
rs8086145	0.91[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833641	chr18:44815063-45020202	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA miRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:44810400-44819200	Weak transcription	Muscle Satellite Cultured Cells	--

Quick Search: