Variant report

Variant rs16968467
Chromosome Location chr15:77057864-77057865
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:77046800-77067800 Weak transcription HUVEC blood vessel
2 chr15:77050000-77058000 Strong transcription Placenta Placenta
3 chr15:77051400-77059400 Strong transcription Liver Liver
4 chr15:77051600-77058000 Strong transcription Breast Myoepithelial Primary Cells Breast
5 chr15:77051800-77058200 Strong transcription Skeletal Muscle Female skeletal muscle
6 chr15:77054200-77058000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr15:77054600-77058000 Strong transcription Brain Inferior Temporal Lobe brain
8 chr15:77055000-77058000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr15:77055000-77058000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr15:77055000-77058000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr15:77055000-77058200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr15:77055000-77064000 Weak transcription H9 Cell Line embryonic stem cell
13 chr15:77055200-77058000 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
14 chr15:77055200-77058000 Strong transcription Duodenum Mucosa Duodenum
15 chr15:77055200-77058200 ZNF genes & repeats GM12878-XiMat blood
16 chr15:77055400-77058000 ZNF genes & repeats Primary B cells from cord blood blood
17 chr15:77055600-77058200 Weak transcription iPS-15b Cell Line embryonic stem cell
18 chr15:77055800-77058000 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
19 chr15:77055800-77058200 Strong transcription Brain Hippocampus Middle brain
20 chr15:77056000-77058000 ZNF genes & repeats Primary hematopoietic stem cells blood
21 chr15:77056000-77058000 Strong transcription Skeletal Muscle Male skeletal muscle
22 chr15:77056000-77058200 Strong transcription Brain Substantia Nigra brain
23 chr15:77056200-77058000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr15:77056200-77058000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr15:77056200-77058000 Strong transcription Colon Smooth Muscle Colon
26 chr15:77056400-77058000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr15:77056400-77058000 Strong transcription Primary T cells fromperipheralblood blood
28 chr15:77056400-77058000 ZNF genes & repeats Thymus Thymus
29 chr15:77056400-77058400 Weak transcription iPS-20b Cell Line embryonic stem cell
30 chr15:77056600-77058000 Strong transcription Primary T regulatory cells fromperipheralblood blood
31 chr15:77056600-77058000 Strong transcription Fetal Brain Male brain
32 chr15:77056600-77058000 Strong transcription Fetal Kidney kidney
33 chr15:77056600-77058000 Strong transcription HepG2 liver
34 chr15:77056600-77058200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
35 chr15:77056600-77058200 Strong transcription Duodenum Smooth Muscle Duodenum
36 chr15:77056600-77058200 Strong transcription Rectal Mucosa Donor 29 rectum
37 chr15:77056800-77058000 Strong transcription Fetal Heart heart
38 chr15:77056800-77058200 Strong transcription Primary T helper naive cells fromperipheralblood blood
39 chr15:77056800-77059000 Strong transcription Primary T helper cells PMA-I stimulated --
40 chr15:77056800-77059600 Strong transcription Primary T helper cells fromperipheralblood blood
41 chr15:77056800-77067600 Weak transcription Osteobl bone
42 chr15:77056800-77068600 Weak transcription HSMMtube muscle
43 chr15:77056800-77083400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
44 chr15:77057000-77058000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr15:77057000-77058000 Strong transcription Primary T cells from cord blood blood
46 chr15:77057000-77058000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
47 chr15:77057000-77058000 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
48 chr15:77057000-77058000 Strong transcription Fetal Brain Female brain
49 chr15:77057000-77058000 Strong transcription Fetal Muscle Trunk muscle
50 chr15:77057000-77058000 Strong transcription Fetal Thymus thymus

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