Variant report

Variant rs16976646
Chromosome Location chr15:56200154-56200155
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:56176000-56216200 Weak transcription Fetal Intestine Small intestine
2 chr15:56188400-56207800 Weak transcription Primary T cells from cord blood blood
3 chr15:56188600-56218400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr15:56190000-56220000 Weak transcription Pancreas Pancrea
5 chr15:56190200-56201800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr15:56190200-56221200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr15:56190400-56219800 Weak transcription Breast Myoepithelial Primary Cells Breast
8 chr15:56192400-56207800 Weak transcription Liver Liver
9 chr15:56192600-56200800 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr15:56192600-56209000 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr15:56197000-56200600 Weak transcription Placenta Amnion Placenta Amnion
12 chr15:56199200-56203600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr15:56199400-56200200 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr15:56199400-56200400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
15 chr15:56199400-56201000 Enhancers HUVEC blood vessel
16 chr15:56199400-56202600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr15:56199400-56203800 Flanking Active TSS A549 lung
18 chr15:56199600-56200200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr15:56199600-56200200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
20 chr15:56199600-56200200 Flanking Active TSS NHDF-Ad bronchial
21 chr15:56199600-56200200 Flanking Active TSS NHEK skin
22 chr15:56199600-56200600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr15:56199600-56200800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr15:56199600-56201600 Weak transcription Primary hematopoietic stem cells blood
25 chr15:56199800-56200200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
26 chr15:56199800-56200200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr15:56199800-56200200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr15:56199800-56200400 Flanking Active TSS Hela-S3 cervix
29 chr15:56199800-56201400 Active TSS Psoas Muscle Psoas
30 chr15:56199800-56203600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
31 chr15:56200000-56200200 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
32 chr15:56200000-56200200 Enhancers Stomach Smooth Muscle stomach
33 chr15:56200000-56200400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr15:56200000-56200400 Enhancers Muscle Satellite Cultured Cells --
35 chr15:56200000-56200600 Weak transcription NHLF lung
36 chr15:56200000-56201400 Enhancers HSMM muscle
37 chr15:56200000-56201800 Enhancers HMEC breast
38 chr15:56200000-56202200 Enhancers NH-A brain
39 chr15:56200000-56202800 Enhancers Osteobl bone
40 chr15:56200000-56203200 Enhancers HSMMtube muscle

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