Variant report

Variant	rs17004933
Chromosome Location	chr4:81461450-81461451
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10033938	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs11725262	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11732907	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11940084	0.82[AMR][1000 genomes]
rs1601512	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1601513	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2132264	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2867780	0.83[EUR][1000 genomes]
rs34306570	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs34975597	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4283653	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs59789768	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6535040	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6535041	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs72874049	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs72874070	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs72874077	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs72874089	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs72874098	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:81460000-81461600	Weak transcription	NHDF-Ad	bronchial
2	chr4:81460800-81462800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
3	chr4:81460800-81463400	Enhancers	Primary T helper cells PMA-I stimulated	--
4	chr4:81461200-81462200	Enhancers	GM12878-XiMat	blood
5	chr4:81461200-81462600	Enhancers	Primary T killer memory cells from peripheral blood	blood
6	chr4:81461200-81464000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
7	chr4:81461400-81462600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
8	chr4:81461400-81462800	Enhancers	Primary T helper naive cells from peripheral blood	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links