Variant report
| Variant | rs17005849 |
|---|---|
| Chromosome Location | chr3:69457941-69457942 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:69450600-69461400 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 2 | chr3:69454800-69458600 | Weak transcription | Fetal Brain Female | brain |
| 3 | chr3:69454800-69459000 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 4 | chr3:69455000-69458200 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 5 | chr3:69455000-69458800 | Strong transcription | NHEK | skin |
| 6 | chr3:69455600-69458400 | Weak transcription | HMEC | breast |
| 7 | chr3:69455800-69458200 | Weak transcription | Right Atrium | heart |
| 8 | chr3:69455800-69458400 | Weak transcription | HSMMtube | muscle |
| 9 | chr3:69455800-69458600 | Weak transcription | Left Ventricle | heart |
| 10 | chr3:69455800-69458600 | Weak transcription | Spleen | Spleen |
| 11 | chr3:69455800-69459600 | Enhancers | Brain Angular Gyrus | brain |
| 12 | chr3:69455800-69461400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 13 | chr3:69456000-69459400 | Weak transcription | Fetal Brain Male | brain |
| 14 | chr3:69456200-69458600 | Weak transcription | Fetal Muscle Leg | muscle |
| 15 | chr3:69456200-69459000 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 16 | chr3:69457000-69459200 | Weak transcription | Placenta | Placenta |
| 17 | chr3:69457000-69470800 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 18 | chr3:69457200-69458800 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 19 | chr3:69457400-69458200 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 20 | chr3:69457400-69458800 | Enhancers | Lung | lung |
| 21 | chr3:69457400-69459200 | Enhancers | Brain Hippocampus Middle | brain |
| 22 | chr3:69457400-69459200 | Enhancers | Brain Substantia Nigra | brain |
| 23 | chr3:69457400-69459800 | Enhancers | Fetal Heart | heart |
| 24 | chr3:69457400-69460400 | Enhancers | Brain Inferior Temporal Lobe | brain |
| 25 | chr3:69457600-69458000 | Weak transcription | Fetal Lung | lung |
| 26 | chr3:69457600-69458400 | Enhancers | Brain Anterior Caudate | brain |
| 27 | chr3:69457600-69459600 | Enhancers | Brain Cingulate Gyrus | brain |
| 28 | chr3:69457800-69458000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 29 | chr3:69457800-69458000 | Enhancers | Brain Germinal Matrix | brain |
| 30 | chr3:69457800-69458000 | Enhancers | Thymus | Thymus |
| 31 | chr3:69457800-69459000 | Enhancers | Adipose Nuclei | Adipose |
| 32 | chr3:69457800-69459800 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
