Variant report

Variant	rs17007786
Chromosome Location	chr1:220632914-220632915
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs17007798	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17007809	0.91[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57150991	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59319544	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59822514	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61161249	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61406326	1.00[AMR][1000 genomes]
rs7543744	1.00[AMR][1000 genomes]
rs7543764	1.00[AMR][1000 genomes]
rs7553213	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:220631400-220633000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr1:220631400-220633200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr1:220631600-220636400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr1:220632600-220633200	Enhancers	Fetal Lung	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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