Variant report
Variant | rs17007839 |
---|---|
Chromosome Location | chr1:220682128-220682129 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr1:220679307..220682266-chr1:220698434..220700635,2 | MCF-7 | breast: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10495150 | 1.00[CEU][hapmap] |
rs1073461 | 1.00[CEU][hapmap] |
rs1193031 | 1.00[CEU][hapmap] |
rs12070516 | 1.00[CEU][hapmap] |
rs12753927 | 0.89[AFR][1000 genomes] |
rs17007842 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs17007855 | 0.89[AFR][1000 genomes] |
rs2786612 | 1.00[CEU][hapmap] |
rs35327085 | 0.89[AFR][1000 genomes] |
rs6541152 | 1.00[CEU][hapmap] |
rs6541153 | 1.00[CEU][hapmap] |
rs6660022 | 1.00[CEU][hapmap] |
rs6672055 | 1.00[CEU][hapmap] |
rs6676051 | 1.00[CEU][hapmap] |
rs6695068 | 0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6696723 | 1.00[ASN][1000 genomes] |
rs73101842 | 1.00[ASN][1000 genomes] |
rs7512507 | 1.00[CEU][hapmap];1.00[ASN][1000 genomes] |
rs7518883 | 1.00[ASN][1000 genomes] |
rs7518985 | 1.00[CEU][hapmap];1.00[ASN][1000 genomes] |
rs7531134 | 1.00[ASN][1000 genomes] |
rs7545089 | 1.00[ASN][1000 genomes] |
rs7547630 | 1.00[CEU][hapmap] |
rs7547728 | 1.00[CEU][hapmap] |
rs7550069 | 1.00[ASN][1000 genomes] |
rs7552147 | 1.00[ASN][1000 genomes] |
rs7556342 | 1.00[CEU][hapmap];1.00[ASN][1000 genomes] |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr1:220680800-220684000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |