Variant report

Variant rs17013402
Chromosome Location chr2:33802634-33802635
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:33757200-33809800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr2:33762200-33809800 Weak transcription Aorta Aorta
3 chr2:33766800-33809800 Weak transcription Rectal Smooth Muscle rectum
4 chr2:33776000-33809800 Weak transcription Pancreas Pancrea
5 chr2:33778400-33806400 Weak transcription Primary T cells from cord blood blood
6 chr2:33778400-33807600 Weak transcription NH-A brain
7 chr2:33778400-33808600 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr2:33780000-33808600 Weak transcription Primary T helper cells fromperipheralblood blood
9 chr2:33780400-33808600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
10 chr2:33780400-33809200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr2:33781200-33809800 Weak transcription Gastric stomach
12 chr2:33782000-33807000 Weak transcription Primary T cells fromperipheralblood blood
13 chr2:33784000-33809800 Weak transcription Right Ventricle heart
14 chr2:33784000-33810000 Weak transcription Fetal Intestine Small intestine
15 chr2:33784200-33809800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr2:33784600-33808400 Weak transcription Fetal Muscle Leg muscle
17 chr2:33786000-33808600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr2:33786400-33808800 Weak transcription Fetal Muscle Trunk muscle
19 chr2:33788200-33805400 Weak transcription Placenta Placenta
20 chr2:33788400-33808800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr2:33788600-33807400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr2:33788600-33808600 Weak transcription Psoas Muscle Psoas
23 chr2:33789400-33809400 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr2:33789600-33808600 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr2:33790800-33808600 Weak transcription Adipose Nuclei Adipose
26 chr2:33791000-33806800 Weak transcription Primary B cells from cord blood blood
27 chr2:33791400-33808600 Weak transcription Left Ventricle heart
28 chr2:33793000-33802800 Weak transcription Stomach Smooth Muscle stomach
29 chr2:33794600-33807000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr2:33796200-33807000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr2:33797600-33810000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
32 chr2:33798200-33807200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
33 chr2:33799800-33808800 Weak transcription A549 lung
34 chr2:33800800-33809800 Weak transcription NHEK skin
35 chr2:33801200-33808800 Weak transcription Liver Liver
36 chr2:33801800-33803000 Enhancers Brain Substantia Nigra brain
37 chr2:33802000-33802800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr2:33802000-33802800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
39 chr2:33802200-33802800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
40 chr2:33802200-33802800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
41 chr2:33802200-33802800 Active TSS Brain Cingulate Gyrus brain
42 chr2:33802200-33802800 Flanking Active TSS Brain Hippocampus Middle brain
43 chr2:33802200-33803000 Enhancers H9 Cell Line embryonic stem cell
44 chr2:33802200-33803000 Enhancers iPS-20b Cell Line embryonic stem cell
45 chr2:33802200-33803600 Enhancers HUES6 Cell Line embryonic stem cell
46 chr2:33802200-33809800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr2:33802200-33823600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr2:33802400-33803000 Enhancers Cortex derived primary cultured neurospheres brain
49 chr2:33802400-33803000 Enhancers Brain Inferior Temporal Lobe brain
50 chr2:33802400-33803200 Enhancers iPS-15b Cell Line embryonic stem cell

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