The 2.0 version of rSNPBase

Variant report

Variant rs17020628
Chromosome Location chr2:37603839-37603840
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:37577400-37607000 Weak transcription Spleen Spleen
2 chr2:37578200-37605400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr2:37578400-37604200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr2:37583600-37607200 Weak transcription HUES6 Cell Line embryonic stem cell
5 chr2:37602200-37604000 Enhancers Colon Smooth Muscle Colon
6 chr2:37602200-37604200 Enhancers Fetal Lung lung
7 chr2:37602400-37604000 Weak transcription Primary monocytes fromperipheralblood blood
8 chr2:37602600-37607600 Enhancers Osteobl bone
9 chr2:37602800-37604000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
10 chr2:37602800-37604000 Enhancers Placenta Amnion Placenta Amnion
11 chr2:37602800-37604200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr2:37602800-37604600 Bivalent Enhancer Primary T helper cells fromperipheralblood blood
13 chr2:37602800-37604800 Bivalent Enhancer Primary T killer naive cells fromperipheralblood blood
14 chr2:37602800-37605000 Enhancers Fetal Stomach stomach
15 chr2:37603000-37604400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
16 chr2:37603000-37604400 Bivalent Enhancer Primary T killer memory cells from peripheral blood blood
17 chr2:37603000-37604400 Weak transcription Monocytes-CD14+_RO01746 blood
18 chr2:37603000-37604600 Bivalent Enhancer Primary T helper memory cells from peripheral blood 2 blood
19 chr2:37603000-37605800 Enhancers HSMMtube muscle
20 chr2:37603200-37604000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr2:37603200-37604000 Flanking Active TSS Rectal Smooth Muscle rectum
22 chr2:37603200-37604000 Flanking Active TSS NHDF-Ad bronchial
23 chr2:37603200-37604200 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
24 chr2:37603200-37604200 Enhancers Thymus Thymus
25 chr2:37603200-37604400 Enhancers Primary T helper 17 cells PMA-I stimulated --
26 chr2:37603200-37604400 Enhancers Aorta Aorta
27 chr2:37603200-37604600 Bivalent Enhancer Fetal Thymus thymus
28 chr2:37603200-37604600 Bivalent Enhancer Dnd41 blood
29 chr2:37603200-37606000 Enhancers HSMM muscle
30 chr2:37603400-37604000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
31 chr2:37603400-37604000 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
32 chr2:37603400-37604000 Enhancers Brain Angular Gyrus brain
33 chr2:37603400-37604000 Enhancers Fetal Muscle Leg muscle
34 chr2:37603400-37604000 Enhancers Psoas Muscle Psoas
35 chr2:37603400-37604200 Flanking Active TSS Primary T cells from cord blood blood
36 chr2:37603400-37604200 Bivalent Enhancer Primary T cells fromperipheralblood blood
37 chr2:37603400-37604400 Flanking Active TSS Primary B cells from cord blood blood
38 chr2:37603400-37604400 Flanking Active TSS Cortex derived primary cultured neurospheres brain
39 chr2:37603400-37604400 Enhancers Colonic Mucosa Colon
40 chr2:37603400-37604600 Active TSS Stomach Smooth Muscle stomach
41 chr2:37603400-37606400 Weak transcription Fetal Adrenal Gland Adrenal Gland
42 chr2:37603400-37606800 Weak transcription Primary neutrophils fromperipheralblood blood
43 chr2:37603600-37604000 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
44 chr2:37603600-37604000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
45 chr2:37603600-37604000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
46 chr2:37603600-37604000 Flanking Active TSS NH-A brain
47 chr2:37603600-37604200 Flanking Active TSS Brain Cingulate Gyrus brain
48 chr2:37603600-37604200 Active TSS Brain Hippocampus Middle brain
49 chr2:37603600-37604400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr2:37603600-37604600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015