Variant report

Variant	rs17020696
Chromosome Location	chr2:37638901-37638902
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 44 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:44)

rs_ID	r²[population]
rs13425396	0.97[EUR][1000 genomes]
rs17020676	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17020693	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4131231	0.82[EUR][1000 genomes]
rs4425058	0.84[EUR][1000 genomes]
rs57223658	1.00[EUR][1000 genomes]
rs57954128	0.84[EUR][1000 genomes]
rs60003859	1.00[EUR][1000 genomes]
rs60205341	0.84[EUR][1000 genomes]
rs60374526	0.84[EUR][1000 genomes]
rs61022900	0.97[EUR][1000 genomes]
rs61356018	0.97[EUR][1000 genomes]
rs61460713	0.84[EUR][1000 genomes]
rs6544075	0.82[EUR][1000 genomes]
rs6708554	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6708931	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6711805	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6727245	1.00[EUR][1000 genomes]
rs6739990	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6741256	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6751874	1.00[EUR][1000 genomes]
rs6752214	1.00[EUR][1000 genomes]
rs6752559	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6755472	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6755835	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6756253	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72865105	0.89[EUR][1000 genomes]
rs72879949	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs72879952	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72879959	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72879966	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72879969	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72879979	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72879983	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72881514	0.97[EUR][1000 genomes]
rs72881515	0.97[EUR][1000 genomes]
rs72881519	0.97[EUR][1000 genomes]
rs72881552	0.89[EUR][1000 genomes]
rs72881557	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72881560	0.89[EUR][1000 genomes]
rs73924621	0.84[EUR][1000 genomes]
rs73924622	0.84[EUR][1000 genomes]
rs73924623	0.84[EUR][1000 genomes]
rs7570240	0.82[EUR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:37625600-37641800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr2:37638800-37639600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr2:37638800-37639600	Enhancers	Fetal Brain Male	brain
4	chr2:37638800-37639600	Enhancers	HSMMtube	muscle
5	chr2:37638800-37639800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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