Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10465699	1.00[CEU][hapmap];0.98[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10494990	1.00[CEU][hapmap]
rs11120491	1.00[CEU][hapmap];0.95[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11120493	0.97[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11120505	0.98[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12047560	1.00[CEU][hapmap]
rs12064019	1.00[CEU][hapmap];0.98[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12069967	0.98[AFR][1000 genomes]
rs12086417	0.97[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12097685	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12131195	1.00[CEU][hapmap]
rs12239750	0.98[AFR][1000 genomes]
rs1349672	1.00[CEU][hapmap]
rs1452634	1.00[CEU][hapmap]
rs55777551	0.98[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55804708	1.00[EUR][1000 genomes]
rs59564038	1.00[EUR][1000 genomes]
rs60799931	1.00[EUR][1000 genomes]
rs6656675	1.00[CEU][hapmap]
rs6695704	1.00[CEU][hapmap]
rs74140931	1.00[EUR][1000 genomes]
rs74140935	1.00[EUR][1000 genomes]
rs74140936	1.00[EUR][1000 genomes]
rs74140938	1.00[EUR][1000 genomes]
rs74143657	0.97[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv873169	chr1:215264486-215453286	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS	Chromatin interactive region miRNA target site	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:215288800-215306600	Weak transcription	NHLF	lung
2	chr1:215291600-215300400	Weak transcription	Osteobl	bone
3	chr1:215293800-215298600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr1:215294000-215299600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr1:215294000-215301400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr1:215294600-215297200	Weak transcription	NHDF-Ad	bronchial

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