Variant report

Variant	rs17032016
Chromosome Location	chr3:34680782-34680783
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs17032054	1.00[AMR][1000 genomes]
rs17032059	1.00[AMR][1000 genomes]
rs6771048	1.00[AMR][1000 genomes]
rs6779034	1.00[AMR][1000 genomes]
rs6779360	1.00[AMR][1000 genomes]
rs6782358	1.00[AMR][1000 genomes]
rs6786940	1.00[AMR][1000 genomes]
rs6787109	1.00[AMR][1000 genomes]
rs6791661	1.00[AMR][1000 genomes]
rs6805914	1.00[AMR][1000 genomes]
rs6806041	1.00[AMR][1000 genomes]
rs7645066	1.00[AMR][1000 genomes]
rs7647967	0.91[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1820420	chr3:34662157-34708263	Enhancers Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:34680000-34681000	Weak transcription	HUES6 Cell Line	embryonic stem cell
2	chr3:34680200-34681200	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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