The 2.0 version of rSNPBase

Variant report

Variant rs17032019
Chromosome Location chr1:114485299-114485300
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:114473600-114499200 Weak transcription Placenta Amnion Placenta Amnion
2 chr1:114474200-114489600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr1:114474800-114488600 Weak transcription Stomach Mucosa stomach
4 chr1:114475400-114485600 Weak transcription Fetal Brain Male brain
5 chr1:114475400-114485600 Weak transcription A549 lung
6 chr1:114477000-114488800 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr1:114479000-114517600 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr1:114480400-114488600 Weak transcription Small Intestine intestine
9 chr1:114482400-114486200 Strong transcription Hela-S3 cervix
10 chr1:114482600-114487000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr1:114482600-114488200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr1:114482800-114486200 Strong transcription HUES6 Cell Line embryonic stem cell
13 chr1:114482800-114486400 Strong transcription iPS-20b Cell Line embryonic stem cell
14 chr1:114483000-114485800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:114483000-114486600 Strong transcription HUES48 Cell Line embryonic stem cell
16 chr1:114483000-114486600 Strong transcription HUES64 Cell Line embryonic stem cell
17 chr1:114483000-114486600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr1:114483000-114486600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr1:114483000-114487800 Strong transcription Fetal Intestine Large intestine
20 chr1:114483000-114488000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr1:114483000-114488400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr1:114483200-114485800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr1:114483200-114486200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr1:114483200-114486200 Strong transcription Rectal Mucosa Donor 31 rectum
25 chr1:114483200-114486400 Strong transcription iPS-18 Cell Line embryonic stem cell
26 chr1:114483200-114486400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr1:114483200-114486400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr1:114483200-114486600 Strong transcription HSMM muscle
29 chr1:114483200-114486800 Strong transcription Breast Myoepithelial Primary Cells Breast
30 chr1:114483200-114487600 Strong transcription Cortex derived primary cultured neurospheres brain
31 chr1:114483400-114486600 Strong transcription Fetal Lung lung
32 chr1:114483400-114488200 Strong transcription Muscle Satellite Cultured Cells --
33 chr1:114483600-114486200 Genic enhancers Primary T helper cells fromperipheralblood blood
34 chr1:114483600-114486600 Strong transcription Rectal Mucosa Donor 29 rectum
35 chr1:114483600-114488200 Strong transcription Primary B cells from peripheral blood blood
36 chr1:114483600-114488800 Weak transcription Psoas Muscle Psoas
37 chr1:114483800-114486200 Genic enhancers Primary T cells from cord blood blood
38 chr1:114483800-114486600 Strong transcription Placenta Placenta
39 chr1:114484000-114486000 Weak transcription Fetal Brain Female brain
40 chr1:114484000-114486200 Genic enhancers Primary T helper cells PMA-I stimulated --
41 chr1:114484000-114488000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr1:114484000-114488600 Weak transcription ES-I3 Cell Line embryonic stem cell
43 chr1:114484000-114488600 Weak transcription iPS-15b Cell Line embryonic stem cell
44 chr1:114484000-114488800 Weak transcription Brain Inferior Temporal Lobe brain
45 chr1:114484000-114488800 Weak transcription Right Atrium heart
46 chr1:114484000-114488800 Weak transcription Right Ventricle heart
47 chr1:114484000-114489400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr1:114484000-114489400 Weak transcription Colonic Mucosa Colon
49 chr1:114484000-114489600 Weak transcription NHLF lung
50 chr1:114484000-114510400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell

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Last update: Aug 31, 2015