The 2.0 version of rSNPBase

Variant report

Variant rs17055373
Chromosome Location chr6:128454411-128454412
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:128419800-128455600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr6:128434400-128455800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
3 chr6:128434400-128456800 Weak transcription Fetal Stomach stomach
4 chr6:128435600-128455600 Weak transcription Left Ventricle heart
5 chr6:128439600-128455600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr6:128439600-128456400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr6:128440200-128469200 Weak transcription HSMM muscle
8 chr6:128443000-128455600 Weak transcription Small Intestine intestine
9 chr6:128443200-128455200 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr6:128445800-128455800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr6:128446600-128455600 Weak transcription Fetal Intestine Large intestine
12 chr6:128446600-128455600 Weak transcription Fetal Intestine Small intestine
13 chr6:128446800-128460800 Weak transcription HepG2 liver
14 chr6:128448000-128455800 Weak transcription NHEK skin
15 chr6:128450200-128480800 Weak transcription Primary B cells from cord blood blood
16 chr6:128452600-128455600 Weak transcription HSMMtube muscle
17 chr6:128452600-128505200 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr6:128452800-128455600 Weak transcription Right Atrium heart
19 chr6:128452800-128458000 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr6:128452800-128459400 Weak transcription Brain Cingulate Gyrus brain
21 chr6:128452800-128459800 Weak transcription Brain Substantia Nigra brain
22 chr6:128452800-128460000 Weak transcription Brain Angular Gyrus brain
23 chr6:128452800-128460000 Weak transcription Brain Anterior Caudate brain
24 chr6:128452800-128464800 Weak transcription Ovary ovary
25 chr6:128453000-128455600 Weak transcription Hela-S3 cervix
26 chr6:128453000-128455800 Weak transcription Muscle Satellite Cultured Cells --
27 chr6:128453000-128456000 Weak transcription Osteobl bone
28 chr6:128453000-128457200 Weak transcription Fetal Heart heart
29 chr6:128453000-128459800 Weak transcription Brain Hippocampus Middle brain
30 chr6:128453000-128459800 Weak transcription Brain Inferior Temporal Lobe brain
31 chr6:128453000-128462600 Weak transcription Fetal Lung lung
32 chr6:128453000-128471600 Weak transcription NH-A brain
33 chr6:128453200-128455600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr6:128453200-128456000 Weak transcription A549 lung
35 chr6:128453200-128456400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr6:128453200-128457800 Weak transcription Stomach Mucosa stomach
37 chr6:128453400-128455600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr6:128453800-128461000 Weak transcription NHLF lung

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Last update: Aug 31, 2015