The 2.0 version of rSNPBase

Variant report

Variant rs17055450
Chromosome Location chr6:128537209-128537210
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:128488200-128565200 Weak transcription Fetal Stomach stomach
2 chr6:128492600-128567800 Weak transcription Ovary ovary
3 chr6:128503200-128541800 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr6:128505800-128538800 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr6:128505800-128552200 Weak transcription Duodenum Mucosa Duodenum
6 chr6:128506000-128561000 Weak transcription Breast Myoepithelial Primary Cells Breast
7 chr6:128520400-128573800 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr6:128522000-128560800 Weak transcription Primary T cells from cord blood blood
9 chr6:128523800-128538200 Weak transcription Fetal Thymus thymus
10 chr6:128523800-128540600 Weak transcription Lung lung
11 chr6:128523800-128543600 Weak transcription Left Ventricle heart
12 chr6:128525200-128539000 Weak transcription HUES48 Cell Line embryonic stem cell
13 chr6:128526800-128541200 Weak transcription Adipose Nuclei Adipose
14 chr6:128527000-128543600 Weak transcription Fetal Intestine Small intestine
15 chr6:128527600-128561000 Weak transcription Esophagus oesophagus
16 chr6:128528200-128558400 Weak transcription Brain Cingulate Gyrus brain
17 chr6:128528400-128561000 Weak transcription Fetal Brain Male brain
18 chr6:128529000-128538000 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr6:128529400-128538200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr6:128529400-128552600 Weak transcription Small Intestine intestine
21 chr6:128529600-128538200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr6:128529800-128561000 Weak transcription Stomach Smooth Muscle stomach
23 chr6:128530000-128539200 Weak transcription HUES64 Cell Line embryonic stem cell
24 chr6:128530000-128542000 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr6:128531000-128539200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr6:128531000-128539800 Weak transcription NHDF-Ad bronchial
27 chr6:128531000-128550600 Weak transcription Brain Inferior Temporal Lobe brain
28 chr6:128531000-128562400 Weak transcription Aorta Aorta
29 chr6:128531200-128538200 Weak transcription HSMM muscle
30 chr6:128531200-128540400 Weak transcription Pancreas Pancrea
31 chr6:128531200-128554600 Weak transcription Right Ventricle heart
32 chr6:128531200-128562400 Weak transcription HSMMtube muscle
33 chr6:128531200-128567800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr6:128531200-128573800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr6:128531400-128538000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr6:128531400-128538600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr6:128531400-128539000 Weak transcription HMEC breast
38 chr6:128531400-128539200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr6:128531400-128539800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr6:128531400-128543200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
41 chr6:128531400-128553600 Weak transcription Muscle Satellite Cultured Cells --
42 chr6:128531800-128538600 Weak transcription NH-A brain
43 chr6:128532000-128538200 Weak transcription Liver Liver
44 chr6:128532000-128545600 Weak transcription NHEK skin
45 chr6:128532000-128554400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
46 chr6:128532000-128561000 Weak transcription Osteobl bone
47 chr6:128532200-128553200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr6:128532400-128539400 Weak transcription iPS-18 Cell Line embryonic stem cell
49 chr6:128532400-128540000 Weak transcription HUVEC blood vessel
50 chr6:128534400-128542200 Weak transcription iPS-20b Cell Line embryonic stem cell

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Last update: Aug 31, 2015