The 2.0 version of rSNPBase

Variant report

Variant rs17055452
Chromosome Location chr6:128538222-128538223
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:128488200-128565200 Weak transcription Fetal Stomach stomach
2 chr6:128492600-128567800 Weak transcription Ovary ovary
3 chr6:128503200-128541800 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr6:128505800-128538800 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr6:128505800-128552200 Weak transcription Duodenum Mucosa Duodenum
6 chr6:128506000-128561000 Weak transcription Breast Myoepithelial Primary Cells Breast
7 chr6:128520400-128573800 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr6:128522000-128560800 Weak transcription Primary T cells from cord blood blood
9 chr6:128523800-128540600 Weak transcription Lung lung
10 chr6:128523800-128543600 Weak transcription Left Ventricle heart
11 chr6:128525200-128539000 Weak transcription HUES48 Cell Line embryonic stem cell
12 chr6:128526800-128541200 Weak transcription Adipose Nuclei Adipose
13 chr6:128527000-128543600 Weak transcription Fetal Intestine Small intestine
14 chr6:128527600-128561000 Weak transcription Esophagus oesophagus
15 chr6:128528200-128558400 Weak transcription Brain Cingulate Gyrus brain
16 chr6:128528400-128561000 Weak transcription Fetal Brain Male brain
17 chr6:128529400-128552600 Weak transcription Small Intestine intestine
18 chr6:128529800-128561000 Weak transcription Stomach Smooth Muscle stomach
19 chr6:128530000-128539200 Weak transcription HUES64 Cell Line embryonic stem cell
20 chr6:128530000-128542000 Weak transcription HUES6 Cell Line embryonic stem cell
21 chr6:128531000-128539200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr6:128531000-128539800 Weak transcription NHDF-Ad bronchial
23 chr6:128531000-128550600 Weak transcription Brain Inferior Temporal Lobe brain
24 chr6:128531000-128562400 Weak transcription Aorta Aorta
25 chr6:128531200-128540400 Weak transcription Pancreas Pancrea
26 chr6:128531200-128554600 Weak transcription Right Ventricle heart
27 chr6:128531200-128562400 Weak transcription HSMMtube muscle
28 chr6:128531200-128567800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr6:128531200-128573800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr6:128531400-128538600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr6:128531400-128539000 Weak transcription HMEC breast
32 chr6:128531400-128539200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr6:128531400-128539800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr6:128531400-128543200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
35 chr6:128531400-128553600 Weak transcription Muscle Satellite Cultured Cells --
36 chr6:128531800-128538600 Weak transcription NH-A brain
37 chr6:128532000-128545600 Weak transcription NHEK skin
38 chr6:128532000-128554400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr6:128532000-128561000 Weak transcription Osteobl bone
40 chr6:128532200-128553200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr6:128532400-128539400 Weak transcription iPS-18 Cell Line embryonic stem cell
42 chr6:128532400-128540000 Weak transcription HUVEC blood vessel
43 chr6:128534400-128542200 Weak transcription iPS-20b Cell Line embryonic stem cell
44 chr6:128534600-128540200 Strong transcription HepG2 liver
45 chr6:128535600-128543400 Weak transcription Stomach Mucosa stomach
46 chr6:128536000-128554800 Weak transcription Brain Substantia Nigra brain
47 chr6:128536800-128541200 Weak transcription Placenta Placenta
48 chr6:128536800-128560600 Weak transcription Fetal Lung lung
49 chr6:128537000-128539000 Weak transcription Primary B cells from peripheral blood blood
50 chr6:128537000-128539600 Weak transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015