Variant report

Variant	rs1706921
Chromosome Location	chr7:105223270-105223271
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs1706906	1.00[AMR][1000 genomes]
rs1706910	1.00[AMR][1000 genomes]
rs1706928	1.00[YRI][hapmap];1.00[AMR][1000 genomes]
rs1721497	1.00[AMR][1000 genomes]
rs1721505	0.93[YRI][hapmap]
rs3864648	1.00[AMR][1000 genomes]
rs940372	1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv981568	chr7:105222012-105223485	Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Enhancers Bivalent/Poised TSS Weak transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:105222000-105229800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
2	chr7:105222200-105229800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr7:105222200-105253000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr7:105222400-105225400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
5	chr7:105222800-105237000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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