Variant report

Variant	rs1706928
Chromosome Location	chr7:105209505-105209506
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr7:105207633-105210414	K562	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:105197284..105199912-chr7:105208394..105210146,2	MCF-7	breast:
2	chr7:105202070..105204888-chr7:105208755..105210562,2	K562	blood:

Variant related genes	Relation type
ENSG00000272604	TF binding region

rs_ID	r²[population]
rs1706906	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1706910	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1706921	1.00[YRI][hapmap];1.00[AMR][1000 genomes]
rs1721497	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1721505	0.95[LWK][hapmap];0.93[YRI][hapmap]
rs3864648	1.00[AMR][1000 genomes]
rs940372	1.00[YRI][hapmap]

Chromatin state (count:120 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:105173400-105210200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr7:105174000-105210200	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
3	chr7:105174000-105212200	Weak transcription	Fetal Heart	heart
4	chr7:105174200-105210200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr7:105174200-105213800	Weak transcription	Pancreatic Islets	Pancreatic Islet
6	chr7:105174600-105210400	Weak transcription	Psoas Muscle	Psoas
7	chr7:105174600-105213200	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr7:105175000-105210400	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr7:105175400-105211000	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr7:105175600-105209600	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
11	chr7:105176000-105210000	Strong transcription	Primary hematopoietic stem cells short term culture	blood
12	chr7:105176000-105210200	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr7:105176000-105210400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
14	chr7:105176000-105210400	Strong transcription	Primary T helper cells fromperipheralblood	blood
15	chr7:105176200-105210400	Strong transcription	Primary monocytes fromperipheralblood	blood
16	chr7:105176200-105210400	Strong transcription	Monocytes-CD14+_RO01746	blood
17	chr7:105176600-105210200	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
18	chr7:105176800-105210400	Strong transcription	Primary T cells fromperipheralblood	blood
19	chr7:105177000-105210200	Strong transcription	Liver	Liver
20	chr7:105183600-105211000	Weak transcription	Small Intestine	intestine
21	chr7:105186400-105210400	Strong transcription	Adipose Nuclei	Adipose
22	chr7:105187800-105210800	Weak transcription	Stomach Mucosa	stomach
23	chr7:105188000-105214200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
24	chr7:105191000-105210200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
25	chr7:105193200-105221400	Weak transcription	H9 Cell Line	embryonic stem cell
26	chr7:105193200-105221600	Weak transcription	Aorta	Aorta
27	chr7:105194600-105210200	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
28	chr7:105194600-105211000	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
29	chr7:105195000-105209600	Strong transcription	Rectal Mucosa Donor 29	rectum
30	chr7:105196000-105221600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
31	chr7:105196200-105212200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
32	chr7:105197800-105210200	Strong transcription	Osteobl	bone
33	chr7:105198200-105209600	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
34	chr7:105198600-105209600	Strong transcription	Fetal Stomach	stomach
35	chr7:105198600-105210400	Strong transcription	Duodenum Mucosa	Duodenum
36	chr7:105198600-105210400	Strong transcription	Fetal Intestine Large	intestine
37	chr7:105198600-105210400	Strong transcription	Fetal Thymus	thymus
38	chr7:105198800-105209600	Strong transcription	Fetal Muscle Leg	muscle
39	chr7:105198800-105210400	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
40	chr7:105199000-105209600	Strong transcription	Sigmoid Colon	Sigmoid Colon
41	chr7:105199400-105221600	Weak transcription	Pancreas	Pancrea
42	chr7:105200800-105211000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
43	chr7:105201000-105217600	Weak transcription	HSMMtube	muscle
44	chr7:105201000-105221600	Weak transcription	Colonic Mucosa	Colon
45	chr7:105201400-105210200	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
46	chr7:105202000-105221600	Weak transcription	Esophagus	oesophagus
47	chr7:105202400-105210000	Strong transcription	HUES64 Cell Line	embryonic stem cell
48	chr7:105202600-105210000	Strong transcription	Primary B cells from cord blood	blood
49	chr7:105202600-105210200	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
50	chr7:105202800-105210400	Strong transcription	HUES48 Cell Line	embryonic stem cell

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