Variant report

Variant	rs17075152
Chromosome Location	chr13:51579750-51579751
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:51562300..51564075-chr13:51577991..51579805,2	K562	blood:

rs_ID	r²[population]
rs17075149	0.93[CEU][hapmap];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs17075173	0.92[CEU][hapmap]
rs2025944	0.92[CEU][hapmap]
rs3790024	0.86[CEU][hapmap]
rs3790025	0.86[CEU][hapmap]
rs73501619	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes]

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:51568000-51579800	Weak transcription	Pancreas	Pancrea
2	chr13:51575400-51580200	Weak transcription	Duodenum Smooth Muscle	Duodenum
3	chr13:51575600-51579800	Weak transcription	Aorta	Aorta
4	chr13:51577800-51580200	Enhancers	Brain Germinal Matrix	brain
5	chr13:51577800-51581000	Enhancers	Fetal Muscle Leg	muscle
6	chr13:51578200-51580200	Enhancers	Fetal Muscle Trunk	muscle
7	chr13:51578200-51581800	Enhancers	Fetal Intestine Large	intestine
8	chr13:51578400-51579800	Enhancers	iPS-15b Cell Line	embryonic stem cell
9	chr13:51578600-51579800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
10	chr13:51578800-51579800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
11	chr13:51578800-51580000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr13:51578800-51580200	Enhancers	HUES6 Cell Line	embryonic stem cell
13	chr13:51578800-51581800	Enhancers	Fetal Intestine Small	intestine
14	chr13:51579000-51579800	Enhancers	iPS-18 Cell Line	embryonic stem cell
15	chr13:51579000-51580400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr13:51579200-51579800	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
17	chr13:51579200-51580000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
18	chr13:51579200-51581200	Enhancers	HSMMtube	muscle
19	chr13:51579400-51580400	Enhancers	HepG2	liver
20	chr13:51579400-51581600	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
21	chr13:51579400-51583800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
22	chr13:51579600-51579800	Bivalent Enhancer	Stomach Smooth Muscle	stomach
23	chr13:51579600-51580600	Weak transcription	Fetal Stomach	stomach
24	chr13:51579600-51581000	Enhancers	Duodenum Mucosa	Duodenum
25	chr13:51579600-51581400	Enhancers	Muscle Satellite Cultured Cells	--

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