The 2.0 version of rSNPBase

Variant report

Variant rs17100392
Chromosome Location chr1:94281597-94281598
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94273600-94282800 Weak transcription Lung lung
2 chr1:94275800-94282400 Enhancers Muscle Satellite Cultured Cells --
3 chr1:94275800-94284200 Enhancers Hela-S3 cervix
4 chr1:94275800-94285000 Enhancers HMEC breast
5 chr1:94276000-94283600 Enhancers HSMM muscle
6 chr1:94276000-94285200 Enhancers Placenta Placenta
7 chr1:94276800-94283800 Enhancers NHEK skin
8 chr1:94277000-94282400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr1:94277000-94284400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr1:94277000-94285000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr1:94277200-94282600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr1:94277600-94284600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr1:94277800-94282600 Weak transcription Fetal Stomach stomach
14 chr1:94278200-94281600 Enhancers iPS-18 Cell Line embryonic stem cell
15 chr1:94278200-94282600 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr1:94278200-94282800 Weak transcription Right Ventricle heart
17 chr1:94278600-94281800 Enhancers ES-I3 Cell Line embryonic stem cell
18 chr1:94278600-94283200 Enhancers Osteobl bone
19 chr1:94278600-94284000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr1:94278800-94282000 Enhancers Placenta Amnion Placenta Amnion
21 chr1:94278800-94282600 Weak transcription Left Ventricle heart
22 chr1:94279200-94281600 Enhancers HUES64 Cell Line embryonic stem cell
23 chr1:94279200-94281800 Enhancers iPS-20b Cell Line embryonic stem cell
24 chr1:94279400-94281800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr1:94279400-94282400 Enhancers Primary hematopoietic stem cells short term culture blood
26 chr1:94279400-94282800 Weak transcription Duodenum Mucosa Duodenum
27 chr1:94279400-94284400 Enhancers Breast Myoepithelial Primary Cells Breast
28 chr1:94279600-94281600 Enhancers Fetal Kidney kidney
29 chr1:94279600-94282400 Weak transcription ES-WA7 Cell Line embryonic stem cell
30 chr1:94279600-94282400 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr1:94279600-94282400 Weak transcription Fetal Intestine Small intestine
32 chr1:94279600-94282400 Weak transcription NHDF-Ad bronchial
33 chr1:94279600-94282600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr1:94279600-94302800 Weak transcription Stomach Smooth Muscle stomach
35 chr1:94279800-94281600 Enhancers H1 Cell Line embryonic stem cell
36 chr1:94279800-94282400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr1:94279800-94282400 Weak transcription HepG2 liver
38 chr1:94279800-94282600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr1:94279800-94282600 Weak transcription NHLF lung
40 chr1:94279800-94284400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
41 chr1:94279800-94284600 Enhancers Primary hematopoietic stem cells blood
42 chr1:94280000-94282200 Weak transcription Adipose Nuclei Adipose
43 chr1:94280000-94282400 Weak transcription Liver Liver
44 chr1:94280000-94282400 Weak transcription Fetal Thymus thymus
45 chr1:94280000-94282600 Weak transcription Skeletal Muscle Female skeletal muscle
46 chr1:94280000-94282800 Weak transcription Fetal Intestine Large intestine
47 chr1:94280000-94285600 Weak transcription H9 Cell Line embryonic stem cell
48 chr1:94280000-94290000 Weak transcription Brain Angular Gyrus brain
49 chr1:94280200-94282200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr1:94280200-94282400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin

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Last update: Aug 31, 2015