Variant report
Variant | rs17105921 |
---|---|
Chromosome Location | chr14:37475285-37475286 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr14:37464102..37465757-chr14:37474715..37476835,2 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs11846664 | 1.00[EUR][1000 genomes] |
rs17105856 | 1.00[EUR][1000 genomes] |
rs17105876 | 0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs17105909 | 1.00[EUR][1000 genomes] |
rs17105928 | 1.00[EUR][1000 genomes] |
rs17105938 | 0.93[ASW][hapmap];1.00[MEX][hapmap];1.00[EUR][1000 genomes] |
rs17105941 | 0.81[YRI][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs17105972 | 1.00[MEX][hapmap] |
rs17105991 | 1.00[MEX][hapmap];1.00[EUR][1000 genomes] |
rs17105999 | 1.00[EUR][1000 genomes] |
rs17106020 | 1.00[EUR][1000 genomes] |
rs17106194 | 1.00[EUR][1000 genomes] |
rs17106252 | 1.00[MEX][hapmap];1.00[EUR][1000 genomes] |
rs17106300 | 1.00[EUR][1000 genomes] |
rs17106370 | 1.00[EUR][1000 genomes] |
rs17106427 | 1.00[EUR][1000 genomes] |
rs17106428 | 1.00[EUR][1000 genomes] |
rs17106431 | 1.00[EUR][1000 genomes] |
rs2093087 | 1.00[EUR][1000 genomes] |
rs2144319 | 1.00[EUR][1000 genomes] |
rs55764696 | 1.00[EUR][1000 genomes] |
rs55987900 | 1.00[EUR][1000 genomes] |
rs56167909 | 1.00[EUR][1000 genomes] |
rs56395950 | 1.00[EUR][1000 genomes] |
rs57432181 | 1.00[EUR][1000 genomes] |
rs57545427 | 1.00[EUR][1000 genomes] |
rs60179583 | 1.00[EUR][1000 genomes] |
rs60717098 | 1.00[EUR][1000 genomes] |
rs60846053 | 1.00[EUR][1000 genomes] |
rs60910364 | 1.00[EUR][1000 genomes] |
rs61200961 | 1.00[EUR][1000 genomes] |
rs698294 | 1.00[EUR][1000 genomes] |
rs712343 | 1.00[EUR][1000 genomes] |
rs712344 | 1.00[EUR][1000 genomes] |
rs712357 | 1.00[EUR][1000 genomes] |
rs712360 | 1.00[EUR][1000 genomes] |
rs712361 | 1.00[EUR][1000 genomes] |
rs7147703 | 1.00[EUR][1000 genomes] |
rs73256266 | 1.00[EUR][1000 genomes] |
rs73256270 | 1.00[EUR][1000 genomes] |
rs73256271 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs73256284 | 1.00[EUR][1000 genomes] |
rs73256290 | 1.00[EUR][1000 genomes] |
rs73256295 | 1.00[EUR][1000 genomes] |
rs73258212 | 1.00[EUR][1000 genomes] |
rs73260317 | 1.00[EUR][1000 genomes] |
rs73260392 | 1.00[EUR][1000 genomes] |
rs73264172 | 1.00[EUR][1000 genomes] |
rs73266178 | 1.00[EUR][1000 genomes] |
rs74045252 | 1.00[EUR][1000 genomes] |
rs74045477 | 1.00[EUR][1000 genomes] |
rs8009539 | 1.00[EUR][1000 genomes] |
rs8009729 | 1.00[EUR][1000 genomes] |
rs848056 | 1.00[EUR][1000 genomes] |
rs848067 | 1.00[EUR][1000 genomes] |
rs848069 | 1.00[EUR][1000 genomes] |
rs848070 | 1.00[EUR][1000 genomes] |
rs848071 | 1.00[EUR][1000 genomes] |
rs848078 | 1.00[EUR][1000 genomes] |
rs848079 | 1.00[EUR][1000 genomes] |
rs9671258 | 1.00[EUR][1000 genomes] |
rs9672077 | 1.00[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv534288 | chr14:37254539-37697745 | Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 17 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr14:37467000-37488800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |