Variant report

Variant	rs17107058
Chromosome Location	chr14:69994221-69994222
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs1045301	1.00[CHB][hapmap]
rs12050199	1.00[CHB][hapmap]
rs12050204	1.00[CHB][hapmap]
rs12589107	1.00[CHB][hapmap]
rs12589533	1.00[CHB][hapmap]
rs12893687	1.00[CHB][hapmap]
rs17107026	0.84[ASN][1000 genomes]
rs17107033	0.93[ASN][1000 genomes]
rs17107046	0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17107065	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61982432	0.89[ASN][1000 genomes]
rs72625684	0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3396933	chr14:69906914-70001258	Enhancers Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Strong transcription Bivalent Enhancer Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv510642	chr14:69983293-70030335	Enhancers Bivalent Enhancer Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69993400-69996600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr14:69994000-69994400	Weak transcription	Right Ventricle	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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