The 2.0 version of rSNPBase

Variant report

Variant rs17110370
Chromosome Location chr1:94199666-94199667
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94189000-94200000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr1:94190600-94200800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr1:94196200-94200600 Weak transcription Placenta Amnion Placenta Amnion
4 chr1:94196200-94205800 Weak transcription Brain Inferior Temporal Lobe brain
5 chr1:94196600-94200000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr1:94196600-94204000 Weak transcription Lung lung
7 chr1:94197200-94199800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr1:94197400-94202000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
9 chr1:94197600-94200400 Weak transcription HSMMtube muscle
10 chr1:94197600-94200600 Weak transcription Hela-S3 cervix
11 chr1:94197600-94201200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr1:94197600-94205800 Weak transcription Spleen Spleen
13 chr1:94197800-94205800 Weak transcription Right Atrium heart
14 chr1:94198000-94199800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:94198000-94200400 Weak transcription HMEC breast
16 chr1:94198000-94200600 Weak transcription NHEK skin
17 chr1:94198000-94200800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr1:94198000-94201200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr1:94198000-94202200 Weak transcription Breast Myoepithelial Primary Cells Breast
20 chr1:94198400-94200600 Weak transcription A549 lung
21 chr1:94198400-94200800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr1:94198600-94200800 Weak transcription iPS-20b Cell Line embryonic stem cell
23 chr1:94198800-94200000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr1:94198800-94200600 Enhancers Adipose Nuclei Adipose
25 chr1:94199000-94200600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr1:94199000-94204000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
27 chr1:94199000-94204000 Weak transcription Fetal Muscle Leg muscle
28 chr1:94199000-94207000 Enhancers HSMM muscle
29 chr1:94199400-94200200 Weak transcription Fetal Muscle Trunk muscle
30 chr1:94199400-94200400 Weak transcription HepG2 liver
31 chr1:94199400-94200800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr1:94199400-94204200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr1:94199400-94205800 Weak transcription iPS-18 Cell Line embryonic stem cell
34 chr1:94199400-94217400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
35 chr1:94199600-94199800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr1:94199600-94203200 Enhancers Muscle Satellite Cultured Cells --
37 chr1:94199600-94204800 Enhancers Osteobl bone

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Last update: Aug 31, 2015