The 2.0 version of rSNPBase

Variant report

Variant rs17110374
Chromosome Location chr1:94208123-94208124
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:21 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94199400-94217400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:94204000-94208200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:94205000-94209400 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr1:94205800-94209200 Enhancers HepG2 liver
5 chr1:94206000-94210600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr1:94206000-94212600 Weak transcription HMEC breast
7 chr1:94206200-94209400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr1:94206200-94209400 Weak transcription NHEK skin
9 chr1:94206200-94211600 Weak transcription Spleen Spleen
10 chr1:94206600-94209400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr1:94206800-94210000 Weak transcription Left Ventricle heart
12 chr1:94206800-94212400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr1:94206800-94212400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr1:94207000-94208600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr1:94207000-94210000 Weak transcription Fetal Lung lung
16 chr1:94207000-94211200 Weak transcription Adipose Nuclei Adipose
17 chr1:94207600-94208200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr1:94207800-94209000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr1:94208000-94208200 Active TSS Aorta Aorta
20 chr1:94208000-94208400 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr1:94208000-94209200 Weak transcription Pancreatic Islets Pancreatic Islet

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Last update: Aug 31, 2015