The 2.0 version of rSNPBase

Variant report

Variant rs17110408
Chromosome Location chr1:94231726-94231727
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:31 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94220000-94254200 Weak transcription Aorta Aorta
2 chr1:94223000-94237000 Weak transcription NHEK skin
3 chr1:94225000-94231800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr1:94225000-94233600 Weak transcription Right Atrium heart
5 chr1:94225600-94233600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr1:94225600-94233800 Weak transcription Fetal Lung lung
7 chr1:94227000-94231800 Weak transcription HepG2 liver
8 chr1:94227200-94233600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr1:94228200-94233800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr1:94229400-94234600 Enhancers Primary Natural Killer cells fromperipheralblood blood
11 chr1:94229800-94233600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr1:94229800-94234200 Weak transcription Pancreas Pancrea
13 chr1:94230400-94233200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr1:94230600-94232000 Weak transcription Fetal Muscle Leg muscle
15 chr1:94230600-94233600 Weak transcription Lung lung
16 chr1:94230800-94231800 Strong transcription HMEC breast
17 chr1:94230800-94233800 Weak transcription Fetal Stomach stomach
18 chr1:94230800-94234000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr1:94231400-94231800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr1:94231600-94232000 Enhancers Primary hematopoietic stem cells short term culture blood
21 chr1:94231600-94232200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr1:94231600-94232200 Enhancers Placenta Placenta
23 chr1:94231600-94232400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr1:94231600-94232800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr1:94231600-94232800 Enhancers Thymus Thymus
26 chr1:94231600-94233000 Enhancers Breast Myoepithelial Primary Cells Breast
27 chr1:94231600-94233800 Enhancers Primary T cells from cord blood blood
28 chr1:94231600-94233800 Enhancers Primary T cells fromperipheralblood blood
29 chr1:94231600-94236000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr1:94231600-94236200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr1:94231600-94236200 Enhancers Fetal Thymus thymus

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Last update: Aug 31, 2015