The 2.0 version of rSNPBase

Variant report

Variant rs17110535
Chromosome Location chr1:94284940-94284941
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94275800-94285000 Enhancers HMEC breast
2 chr1:94276000-94285200 Enhancers Placenta Placenta
3 chr1:94277000-94285000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr1:94279600-94302800 Weak transcription Stomach Smooth Muscle stomach
5 chr1:94280000-94285600 Weak transcription H9 Cell Line embryonic stem cell
6 chr1:94280000-94290000 Weak transcription Brain Angular Gyrus brain
7 chr1:94280400-94285000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr1:94280800-94285800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr1:94281200-94289600 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr1:94281400-94285000 Enhancers Primary monocytes fromperipheralblood blood
11 chr1:94281400-94285600 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr1:94281400-94285800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr1:94281600-94285000 Weak transcription HUES48 Cell Line embryonic stem cell
14 chr1:94281600-94285400 Weak transcription iPS-18 Cell Line embryonic stem cell
15 chr1:94281800-94285600 Weak transcription iPS-20b Cell Line embryonic stem cell
16 chr1:94282400-94285800 Enhancers Placenta Amnion Placenta Amnion
17 chr1:94282800-94285000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr1:94283000-94285400 Weak transcription HUES64 Cell Line embryonic stem cell
19 chr1:94283000-94285600 Enhancers Primary hematopoietic stem cells short term culture blood
20 chr1:94283000-94286000 Weak transcription H1 Cell Line embryonic stem cell
21 chr1:94283000-94288400 Weak transcription NHDF-Ad bronchial
22 chr1:94283200-94286000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr1:94283200-94286600 Weak transcription A549 lung
24 chr1:94283200-94286800 Weak transcription HSMMtube muscle
25 chr1:94283400-94285800 Weak transcription NH-A brain
26 chr1:94283400-94286800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr1:94283400-94290000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr1:94283400-94310000 Weak transcription Skeletal Muscle Male skeletal muscle
29 chr1:94283600-94286800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr1:94283600-94286800 Weak transcription Right Atrium heart
31 chr1:94283600-94286800 Weak transcription HSMM muscle
32 chr1:94283600-94287800 Weak transcription Muscle Satellite Cultured Cells --
33 chr1:94283600-94288400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr1:94283600-94293400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr1:94284000-94285600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr1:94284000-94285800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr1:94284000-94294600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
38 chr1:94284200-94286000 Weak transcription HUVEC blood vessel
39 chr1:94284200-94286400 Weak transcription ES-WA7 Cell Line embryonic stem cell
40 chr1:94284200-94292200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr1:94284200-94306200 Weak transcription Fetal Muscle Trunk muscle
42 chr1:94284200-94311200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
43 chr1:94284400-94285200 Enhancers NHEK skin
44 chr1:94284400-94285400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
45 chr1:94284400-94285600 Weak transcription ES-I3 Cell Line embryonic stem cell
46 chr1:94284400-94286600 Weak transcription Fetal Adrenal Gland Adrenal Gland
47 chr1:94284400-94287400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr1:94284400-94289600 Weak transcription Breast Myoepithelial Primary Cells Breast
49 chr1:94284400-94296000 Weak transcription Fetal Intestine Small intestine
50 chr1:94284600-94287000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015