Variant report

No.	Distal block	Cell Line	Cell type
1	chr1:71151065..71151734-chr1:71515451..71516000,2	MCF-7	breast:
2	chr1:71150765..71151639-chr1:71429287..71429792,2	MCF-7	breast:
3	chr1:71150946..71151636-chr1:71515358..71516367,3	K562	blood:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11209690	1.00[EUR][1000 genomes]
rs12058271	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12070022	1.00[EUR][1000 genomes]
rs12074313	1.00[EUR][1000 genomes]
rs12092951	0.93[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12096502	1.00[EUR][1000 genomes]
rs12098192	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1577367	1.00[EUR][1000 genomes]
rs17131342	1.00[EUR][1000 genomes]
rs17131396	1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1932059	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28415396	1.00[EUR][1000 genomes]
rs2992040	1.00[EUR][1000 genomes]
rs72926266	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72928383	1.00[EUR][1000 genomes]
rs72928385	1.00[EUR][1000 genomes]
rs74085288	1.00[EUR][1000 genomes]
rs7516046	1.00[EUR][1000 genomes]
rs7544159	1.00[EUR][1000 genomes]
rs9662819	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv871024	chr1:71088106-71169865	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:71150800-71151600	Enhancers	H1 Cell Line	embryonic stem cell
2	chr1:71150800-71151600	Enhancers	K562	blood
3	chr1:71151000-71151800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr1:71151200-71151600	Enhancers	Pancreas	Pancrea

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