The 2.0 version of rSNPBase

Variant report

Variant rs17131674
Chromosome Location chr1:93411317-93411318
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93400400-93416600 Weak transcription Fetal Intestine Small intestine
2 chr1:93400800-93421800 Weak transcription Fetal Lung lung
3 chr1:93405800-93412600 Enhancers Brain Anterior Caudate brain
4 chr1:93406200-93415200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr1:93406600-93413200 Weak transcription HMEC breast
6 chr1:93407000-93411600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
7 chr1:93407000-93412200 Enhancers Primary T helper naive cells fromperipheralblood blood
8 chr1:93407000-93412800 Enhancers Primary B cells from peripheral blood blood
9 chr1:93407200-93412200 Enhancers Brain Inferior Temporal Lobe brain
10 chr1:93407600-93415400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr1:93407800-93412600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
12 chr1:93407800-93412600 Enhancers Brain Cingulate Gyrus brain
13 chr1:93408400-93411400 Enhancers Skeletal Muscle Female skeletal muscle
14 chr1:93408600-93411400 Enhancers Fetal Heart heart
15 chr1:93408600-93411600 Enhancers Primary T helper cells PMA-I stimulated --
16 chr1:93408600-93411600 Enhancers Primary T killer naive cells fromperipheralblood blood
17 chr1:93408600-93412200 Enhancers Primary T helper cells fromperipheralblood blood
18 chr1:93408800-93411400 Enhancers Colon Smooth Muscle Colon
19 chr1:93408800-93411400 Enhancers Dnd41 blood
20 chr1:93408800-93411800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
21 chr1:93408800-93412200 Enhancers Brain Angular Gyrus brain
22 chr1:93408800-93412400 Enhancers Primary T cells from cord blood blood
23 chr1:93409000-93413200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr1:93409000-93415200 Weak transcription A549 lung
25 chr1:93409000-93415400 Weak transcription HSMMtube muscle
26 chr1:93409200-93413200 Weak transcription NHEK skin
27 chr1:93409200-93415200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr1:93409200-93415200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr1:93409200-93415200 Weak transcription Duodenum Mucosa Duodenum
30 chr1:93409200-93421200 Weak transcription Fetal Brain Female brain
31 chr1:93409400-93415200 Weak transcription Stomach Mucosa stomach
32 chr1:93409400-93415200 Weak transcription NHDF-Ad bronchial
33 chr1:93409400-93415400 Weak transcription Osteobl bone
34 chr1:93409600-93426000 Weak transcription Lung lung
35 chr1:93409800-93411400 Flanking Active TSS Primary B cells from cord blood blood
36 chr1:93409800-93411400 Enhancers Primary T killer memory cells from peripheral blood blood
37 chr1:93409800-93411400 Enhancers Fetal Thymus thymus
38 chr1:93409800-93411600 Enhancers Primary T helper naive cells from peripheral blood blood
39 chr1:93410000-93411400 Enhancers Primary monocytes fromperipheralblood blood
40 chr1:93410000-93411400 Enhancers Ovary ovary
41 chr1:93410000-93411400 Enhancers Psoas Muscle Psoas
42 chr1:93410000-93411400 Enhancers Rectal Smooth Muscle rectum
43 chr1:93410000-93411600 Enhancers Skeletal Muscle Male skeletal muscle
44 chr1:93410000-93411600 Flanking Active TSS GM12878-XiMat blood
45 chr1:93410000-93412400 Enhancers Liver Liver
46 chr1:93410200-93411400 Enhancers Adipose Nuclei Adipose
47 chr1:93410200-93412400 Enhancers HepG2 liver
48 chr1:93410400-93411400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
49 chr1:93410400-93411400 Enhancers Duodenum Smooth Muscle Duodenum
50 chr1:93410400-93411400 Enhancers Fetal Stomach stomach

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Last update: Aug 31, 2015