The 2.0 version of rSNPBase
Home
Search
Document
What's New
Tutorial
Data Content
Download
Feedback
About Us
Variant report
Variant
rs17137758
Chromosome Location
chr7:104099931-104099932
allele
C/T
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:0)
CpG islands (count:0)
Chromatin interactive region (count:1)
LncRNA region (count:0)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
No data
No data
(count:1 , 50 per page) page:
1
No.
Distal block
Cell Line
Cell type
Cell Stage
1
chr7:104090683..104093466-chr7:104097985..104100510,2
K562
blood:
No data
No data
No data
No data
Extended variants information (count: 9 )
Associated traits (count: 0)
rSNPs within LD-proxies of this variant (count:8)
rs_ID
r
2
[population]
rs17137736
0.93[YRI][hapmap]
rs4730008
1.00[JPT][hapmap]
rs57941093
0.97[ASN][1000 genomes]
rs58508368
1.00[ASN][1000 genomes]
rs58876754
0.97[ASN][1000 genomes]
rs59883984
0.97[ASN][1000 genomes]
rs60680884
0.97[ASN][1000 genomes]
rs6960997
1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
No.
Variant name
Chromosome position
Chromatin state
Related regulatory elements
Target genes
Extended variants
Associated traits
1
nsv888925
chr7:104047599-104170560
Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS
Chromatin interactive region
n/a
inside rSNPs
diseases
No data
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
Quick links