Variant report

Variant	rs17139166
Chromosome Location	chr7:104253664-104253665
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:104240202..104242098-chr7:104253017..104254852,2	K562	blood:

Extended variants
information (count: 40 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs10246540	1.00[CHB][hapmap];0.88[JPT][hapmap]
rs10272959	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11761636	0.90[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11773248	0.92[CHB][hapmap];0.88[JPT][hapmap]
rs11977439	0.85[CHB][hapmap];0.88[JPT][hapmap]
rs11983223	0.85[CHB][hapmap];1.00[JPT][hapmap]
rs1465342	0.92[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs16870065	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17139105	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17139109	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17139722	0.92[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs17139736	0.90[CHB][hapmap];1.00[JPT][hapmap]
rs17141055	1.00[EUR][1000 genomes]
rs17141299	1.00[EUR][1000 genomes]
rs2193198	0.92[CHB][hapmap];1.00[JPT][hapmap]
rs2193200	0.92[CHB][hapmap];1.00[JPT][hapmap]
rs2193205	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2193212	1.00[CHB][hapmap];0.88[JPT][hapmap];0.83[ASN][1000 genomes]
rs2193214	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2385247	0.84[CHB][hapmap];0.88[JPT][hapmap];0.97[ASN][1000 genomes]
rs2385248	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs2385254	0.92[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs3919550	1.00[CHB][hapmap];0.88[JPT][hapmap]
rs4131017	0.83[CHB][hapmap];1.00[JPT][hapmap]
rs4140743	1.00[EUR][1000 genomes]
rs4357228	0.84[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes]
rs4549708	1.00[EUR][1000 genomes]
rs4612275	0.90[CHB][hapmap];1.00[JPT][hapmap]
rs57123751	1.00[EUR][1000 genomes]
rs57138274	1.00[EUR][1000 genomes]
rs57698969	1.00[EUR][1000 genomes]
rs57935592	1.00[EUR][1000 genomes]
rs61685636	1.00[EUR][1000 genomes]
rs6944590	0.92[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6948948	1.00[CHB][hapmap];0.88[JPT][hapmap]
rs6967399	1.00[CHB][hapmap];0.88[JPT][hapmap]
rs759533	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7784639	0.81[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7805947	1.00[CHB][hapmap];0.88[JPT][hapmap];0.83[ASN][1000 genomes]
rs929661	1.00[CHB][hapmap];0.82[JPT][hapmap]

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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