The 2.0 version of rSNPBase

Variant report

Variant rs17141101
Chromosome Location chr3:46454350-46454351
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:46438800-46459800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr3:46448600-46460000 Weak transcription Gastric stomach
3 chr3:46449600-46457600 Weak transcription Primary B cells from cord blood blood
4 chr3:46450000-46457600 Weak transcription Stomach Mucosa stomach
5 chr3:46450000-46457800 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr3:46450200-46456800 Weak transcription Fetal Intestine Large intestine
7 chr3:46450200-46457400 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr3:46450200-46457600 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr3:46450600-46457000 Weak transcription Duodenum Mucosa Duodenum
10 chr3:46451000-46457600 Weak transcription Primary monocytes fromperipheralblood blood
11 chr3:46451600-46458400 Enhancers Fetal Heart heart
12 chr3:46451800-46456800 Weak transcription Fetal Intestine Small intestine
13 chr3:46452000-46454400 Weak transcription Dnd41 blood
14 chr3:46452600-46455000 Weak transcription Placenta Placenta
15 chr3:46452600-46456800 Weak transcription Spleen Spleen
16 chr3:46452800-46456400 Weak transcription Lung lung
17 chr3:46452800-46457400 Weak transcription Left Ventricle heart
18 chr3:46453000-46454400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr3:46453600-46455800 Enhancers Primary hematopoietic stem cells blood
20 chr3:46453600-46456200 Enhancers Fetal Thymus thymus
21 chr3:46453800-46454400 Enhancers Right Atrium heart
22 chr3:46453800-46454800 Enhancers Pancreatic Islets Pancreatic Islet
23 chr3:46453800-46455400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr3:46453800-46455800 Enhancers Adipose Nuclei Adipose
25 chr3:46453800-46456000 Enhancers Primary hematopoietic stem cells short term culture blood
26 chr3:46453800-46456000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr3:46454000-46454400 Weak transcription Primary neutrophils fromperipheralblood blood
28 chr3:46454000-46454400 Enhancers Psoas Muscle Psoas
29 chr3:46454000-46454400 Enhancers Right Ventricle heart
30 chr3:46454000-46454400 Enhancers Monocytes-CD14+_RO01746 blood
31 chr3:46454000-46454600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr3:46454000-46454600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
33 chr3:46454000-46454600 Enhancers Skeletal Muscle Female skeletal muscle
34 chr3:46454000-46455000 Enhancers Brain Hippocampus Middle brain
35 chr3:46454200-46454400 Enhancers HSMM muscle
36 chr3:46454200-46454600 Enhancers Fetal Lung lung
37 chr3:46454200-46454600 Enhancers Skeletal Muscle Male skeletal muscle
38 chr3:46454200-46454600 Enhancers Thymus Thymus
39 chr3:46454200-46454600 Enhancers K562 blood
40 chr3:46454200-46454800 Enhancers Primary T cells from cord blood blood
41 chr3:46454200-46455000 Flanking Active TSS HUVEC blood vessel
42 chr3:46454200-46457400 Weak transcription Small Intestine intestine

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Last update: Aug 31, 2015