Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs1006505	0.92[CEU][hapmap]
rs1006506	0.96[CEU][hapmap];0.87[EUR][1000 genomes]
rs10266911	0.91[CEU][hapmap]
rs10275164	0.92[CEU][hapmap]
rs16883780	0.96[CEU][hapmap];0.90[EUR][1000 genomes]
rs17170777	0.86[CEU][hapmap];0.83[EUR][1000 genomes]
rs17170785	0.95[CEU][hapmap]
rs4725759	0.91[CEU][hapmap]
rs4725760	0.92[CEU][hapmap]
rs4726908	0.92[CEU][hapmap]
rs4726909	0.95[CEU][hapmap]
rs4726910	0.92[CEU][hapmap]
rs4726911	0.92[CEU][hapmap]
rs55645581	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55806438	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55893822	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56128998	0.91[EUR][1000 genomes]
rs59099493	0.91[EUR][1000 genomes]
rs66949315	0.88[EUR][1000 genomes]
rs6947567	0.95[CEU][hapmap]
rs6951293	0.95[CEU][hapmap];0.83[EUR][1000 genomes]
rs6966084	0.96[EUR][1000 genomes]
rs73168548	0.87[EUR][1000 genomes]
rs73168563	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs73168568	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73168569	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7792198	1.00[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1023913	chr7:147521075-147806318	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv1026058	chr7:147521109-147783042	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv539179	chr7:147521109-147783042	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv934002	chr7:147521110-147807705	Enhancers Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
5	nsv1017610	chr7:147523752-147806427	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:147738400-147748000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr7:147742200-147743400	Enhancers	Pancreas	Pancrea

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