The 2.0 version of rSNPBase

Variant report

Variant rs17210898
Chromosome Location chr12:51056511-51056512
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:51015600-51075800 Weak transcription Colonic Mucosa Colon
2 chr12:51016000-51065000 Weak transcription Esophagus oesophagus
3 chr12:51022000-51065200 Weak transcription iPS-18 Cell Line embryonic stem cell
4 chr12:51022000-51068400 Weak transcription H1 Cell Line embryonic stem cell
5 chr12:51022600-51064600 Weak transcription Stomach Smooth Muscle stomach
6 chr12:51028400-51092400 Weak transcription Gastric stomach
7 chr12:51030800-51064800 Weak transcription Spleen Spleen
8 chr12:51030800-51065000 Weak transcription Left Ventricle heart
9 chr12:51031400-51058800 Weak transcription Small Intestine intestine
10 chr12:51031400-51064800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr12:51031800-51068200 Weak transcription Primary T helper naive cells from peripheral blood blood
12 chr12:51032200-51065000 Weak transcription Fetal Lung lung
13 chr12:51032200-51069000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
14 chr12:51035600-51064600 Weak transcription Lung lung
15 chr12:51036000-51068200 Weak transcription Thymus Thymus
16 chr12:51036200-51057800 Weak transcription Hela-S3 cervix
17 chr12:51036200-51068200 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr12:51036800-51070000 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr12:51037000-51058200 Weak transcription Fetal Intestine Small intestine
20 chr12:51038000-51064800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
21 chr12:51041200-51067200 Weak transcription Fetal Stomach stomach
22 chr12:51041400-51065000 Weak transcription K562 blood
23 chr12:51041400-51068000 Weak transcription iPS-20b Cell Line embryonic stem cell
24 chr12:51041600-51057800 Weak transcription NHEK skin
25 chr12:51041800-51057600 Weak transcription NH-A brain
26 chr12:51041800-51066200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr12:51041800-51091400 Weak transcription Pancreas Pancrea
28 chr12:51044000-51070800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr12:51045600-51067200 Weak transcription HUVEC blood vessel
30 chr12:51048800-51058000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr12:51049000-51065000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr12:51049200-51108600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
33 chr12:51049800-51065000 Weak transcription HMEC breast
34 chr12:51051200-51068200 Weak transcription Fetal Muscle Trunk muscle
35 chr12:51051600-51070400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr12:51051800-51068400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
37 chr12:51052200-51071600 Weak transcription Osteobl bone
38 chr12:51052400-51068800 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr12:51052600-51062400 Enhancers Cortex derived primary cultured neurospheres brain
40 chr12:51052800-51065200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr12:51053000-51056800 Strong transcription Monocytes-CD14+_RO01746 blood
42 chr12:51053000-51060600 Enhancers Brain Angular Gyrus brain
43 chr12:51053000-51062000 Enhancers Brain Hippocampus Middle brain
44 chr12:51053000-51062200 Enhancers Brain Substantia Nigra brain
45 chr12:51053000-51086200 Weak transcription Psoas Muscle Psoas
46 chr12:51053200-51059800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
47 chr12:51053200-51060400 Enhancers Brain Cingulate Gyrus brain
48 chr12:51053200-51070000 Weak transcription Primary T killer memory cells from peripheral blood blood
49 chr12:51053200-51092400 Weak transcription iPS-15b Cell Line embryonic stem cell
50 chr12:51053400-51056600 Strong transcription Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015