Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10957224	0.86[ASN][1000 genomes]
rs11786913	0.89[ASN][1000 genomes]
rs11985228	0.87[ASN][1000 genomes]
rs11997596	0.93[CHB][hapmap];0.89[JPT][hapmap];1.00[YRI][hapmap];0.90[ASN][1000 genomes]
rs12548819	0.86[ASN][1000 genomes]
rs12548859	0.86[ASN][1000 genomes]
rs1451835	0.86[CHB][hapmap];0.88[JPT][hapmap];0.87[ASN][1000 genomes]
rs1451836	0.87[ASN][1000 genomes]
rs1451851	0.86[ASN][1000 genomes]
rs17821257	0.89[ASN][1000 genomes]
rs1993125	0.92[CHB][hapmap];0.88[JPT][hapmap];1.00[YRI][hapmap];0.90[ASN][1000 genomes]
rs2053938	0.87[ASN][1000 genomes]
rs2084799	0.86[CHB][hapmap];0.88[JPT][hapmap];0.85[ASN][1000 genomes]
rs2198220	0.86[ASN][1000 genomes]
rs2351954	0.86[ASN][1000 genomes]
rs41433850	0.86[CHB][hapmap];0.88[JPT][hapmap];0.87[ASN][1000 genomes]
rs4454265	0.84[ASN][1000 genomes]
rs55755287	0.87[ASN][1000 genomes]
rs59909095	0.86[ASN][1000 genomes]
rs62511508	0.92[ASN][1000 genomes]
rs6996038	0.88[ASN][1000 genomes]
rs7000955	0.93[CHB][hapmap];0.89[JPT][hapmap];0.90[ASN][1000 genomes]
rs7001218	0.93[CHB][hapmap];0.89[JPT][hapmap];0.80[YRI][hapmap];0.90[ASN][1000 genomes]
rs718710	0.87[ASN][1000 genomes]
rs7835100	0.85[ASN][1000 genomes]
rs958461	0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1024863	chr8:63275987-63439650	Enhancers Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv539636	chr8:63275987-63439650	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv1018879	chr8:63281724-63937632	Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
4	nsv831339	chr8:63312449-63501127	Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:63408600-63411600	Weak transcription	Fetal Intestine Large	intestine

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